DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and scl-1

DIOPT Version :9

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_502502.1 Gene:scl-1 / 186053 WormBaseID:WBGene00004742 Length:207 Species:Caenorhabditis elegans


Alignment Length:201 Identity:50/201 - (24%)
Similarity:79/201 - (39%) Gaps:23/201 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SRHKADFLHAHNKRRNFLA----LGKVPGYYPAARMATMVWDDELQYLSMLNTRTCKLDHDDCHN 120
            |..::..:.||||.|:.:|    :.|.....||..|..||.|..:...:.....||...|.    
 Worm    18 STGQSSIVDAHNKLRSAIAKSTYVAKGTKKEPATDMRKMVVDSTVAASAQNYANTCPTGHS---- 78

  Fly   121 TYRYANSGQNLCAVWRPRSPHV-NVTSLVEECLGLWFNEFDLIDSSFIDSFKVTPIFED-YGHFA 183
              :....|:||  .|...|..| ::.|..|.....|..||.  |..:..:...|.:|.. .||..
 Worm    79 --KGTGYGENL--YWSWTSADVGSLDSYGEIAAAAWEKEFQ--DFGWKSNAMDTTLFNSGIGHAT 137

  Fly   184 ELSVDKNFAVGCSIMRFTRPDYPSVYIYN---FICNYASL-YALGAPVYETGRAASRCT-TGKSH 243
            :::.....::||.:....|.  .|:...|   .:|.|:.. ..:|.|:|:.|...|.|: :.|..
 Worm   138 QMAWANTSSIGCGVKNCGRD--ASMRNMNKIAVVCQYSPPGNTMGRPIYKEGTTCSSCSGSTKCD 200

  Fly   244 FYPGLC 249
            ...|||
 Worm   201 TASGLC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 SCP_euk 63..218 CDD:240180 38/163 (23%)
scl-1NP_502502.1 SCP 19..174 CDD:214553 39/166 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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