DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and scl-6

DIOPT Version :9

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_502508.1 Gene:scl-6 / 183343 WormBaseID:WBGene00008028 Length:209 Species:Caenorhabditis elegans


Alignment Length:206 Identity:49/206 - (23%)
Similarity:81/206 - (39%) Gaps:22/206 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 VQVDVSRHKADFL-HAHNKRRNFLALG--KVPG-YYPA-ARMATMVWDDELQYLSMLNTRTCKLD 114
            |..:.|.....|: ..||..|:.||.|  .:.| ..|| :.:..|.||..|...:.....||...
 Worm    16 VDAEFSSSTQQFIVDLHNSFRSKLATGTYSINGTLKPAGSNIRKMSWDSTLATSAQTYANTCPTG 80

  Fly   115 HDDCHNTYRYANSGQNLCAVWRPRSPHVNVTSLVEECLGL-WFNEFDLIDSSFIDSFKVTPIFE- 177
            ..:...|      |:||  .||..|.:::...:......: |..||.  ...:..::....:|: 
 Worm    81 FSNTQGT------GENL--YWRTTSANISGLDIYGGAASVSWEQEFQ--KYGWATNYFSQELFDT 135

  Fly   178 DYGHFAELSVDKNFAVGCSIMRFTRPDYPSVYIYNFICNYASL--YALGAPVYETGRAASRCTTG 240
            ..|:..:::..|...|||.:....: |...:.....:|:|..|  | :...:|..|...|:|.||
 Worm   136 GVGNGTQMAWAKTNLVGCGVKNCGK-DSTGLNKVAVVCHYKPLGRY-VDQMIYTAGFTCSQCPTG 198

  Fly   241 KS-HFYPGLCS 250
            .| ....|||:
 Worm   199 TSCDQTTGLCA 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 SCP_euk 63..218 CDD:240180 34/161 (21%)
scl-6NP_502508.1 SCP 23..176 CDD:214553 35/163 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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