DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and scl-13

DIOPT Version :9

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_504055.1 Gene:scl-13 / 178798 WormBaseID:WBGene00019179 Length:208 Species:Caenorhabditis elegans


Alignment Length:209 Identity:49/209 - (23%)
Similarity:82/209 - (39%) Gaps:38/209 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SRHKADFLHAHNKRRNFLALGKVPGYYPAA--------RMATMVWDDELQYLSMLNTRTCKLDHD 116
            |..:...:.||||.|:.:|.|.    |.||        .|..:|||:.:...:......|..||.
 Worm    20 STAQGQIVDAHNKLRSAIAQGS----YVAAGTQEPSASNMRKIVWDETVAAAAQEYAEGCPDDHS 80

  Fly   117 DCHNTYRYANSGQNLCAVWRPRSPHVNVTSLVEECLGL-----WFNEFDLI--DSSFIDSFKVTP 174
            .       .:.|:||...|...:|    :||  :..|:     |.:||...  .|:|:|.   ..
 Worm    81 G-------TSYGENLYWSWSSSAP----SSL--DKFGVAASNSWESEFQKYGWTSTFLDE---AG 129

  Fly   175 IFEDYGHFAELSVDKNFAVGCSIMRFTR-PDYPSVYIYNFICNYASL-YALGAPVYETGRAASRC 237
            .....||..:::..:...:||.|....: .:..::|....:|.|.|. ..:.:.:|:.|...|.|
 Worm   130 FATGIGHATQMAWAETSKIGCGIKNCGKDANKKNMYKVAVVCQYDSAGNMMDSDIYQQGETCSAC 194

  Fly   238 TTGKS-HFYPGLCS 250
            :...| ....|||:
 Worm   195 SEDASCEQDSGLCA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 SCP_euk 63..218 CDD:240180 38/170 (22%)
scl-13NP_504055.1 SCP 21..174 CDD:214553 38/172 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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