DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and crispld2

DIOPT Version :10

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_003199065.1 Gene:crispld2 / 100535149 ZFINID:ZDB-GENE-130131-1 Length:508 Species:Danio rerio


Alignment Length:236 Identity:59/236 - (25%)
Similarity:96/236 - (40%) Gaps:56/236 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 FHRRCQPDAVQVD--VSRHKA-------DFLHAHNKRRNFLALGKVPGYYP-AARMATMVWDDEL 100
            :....:|::.:.|  |...:|       :.|..|||.|     |:|   || |:.|..|:|||||
Zfish    35 YQEELEPNSTKPDAPVRTRRAIEWSDREEILKLHNKLR-----GEV---YPTASNMEYMIWDDEL 91

  Fly   101 QYLSMLNTRTCKLDH--DDCHNTYRYANSGQNLCAVW-RPRSPHVNVTSLVEECLGLWFNEFDLI 162
            :..:......|:.:|  .|.     ..:.||||...| |.|||..:|.:        |::|  :.
Zfish    92 ERSATSWAEQCQWEHGPQDL-----LMSIGQNLAVHWGRYRSPAYHVQA--------WYDE--VK 141

  Fly   163 DSSFIDSFKVTPIFED------YGHFAELSVDKNFAVGCSIMRFTRPDY------PSVYIYNFIC 215
            |.::....:..|...:      ..|:.:|.......|||::....|.:.      .:||:   :|
Zfish   142 DYTYPYPHECNPWCPERCSGPMCTHYTQLVWATTNRVGCAVHVCPRMNVWGEIWENAVYL---VC 203

  Fly   216 NYASL-YALGAPVYETGRAASRCTTGKSHFYPGLCSTREVY 255
            ||:.. ..:|...|:.||..|:|...    |.|:|.....|
Zfish   204 NYSPKGNWIGEAPYQHGRPCSQCPPS----YGGVCRDNLCY 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 CAP_euk 63..218 CDD:349399 45/177 (25%)
crispld2XP_003199065.1 CAP_CRISPLD2 61..206 CDD:349410 44/170 (26%)
LCCL 299..382 CDD:128866
LCCL 402..495 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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