DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and r3hdml

DIOPT Version :10

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_017953344.1 Gene:r3hdml / 100492715 XenbaseID:XB-GENE-1011048 Length:253 Species:Xenopus tropicalis


Alignment Length:207 Identity:54/207 - (26%)
Similarity:83/207 - (40%) Gaps:47/207 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 RHKADFLHAHNKRRNFLALGKVPGYYPAARMATMVWDDELQYLSMLNTRTCKLDHDDCHNTYRYA 125
            |..:..|..||:.|:     ||  :.|||.|..||||:.|...:......||.||.. :...||.
 Frog    61 RDMSALLDYHNQVRS-----KV--FPPAANMEYMVWDERLAKSAESWANQCKWDHGP-NQLMRYI 117

  Fly   126 NSGQNLCAVWRPRSPHV-NVTSLVEECLGLWFNEFDLIDSSFIDSFKVTPIFED------YGHFA 183
              ||||       |.|. ...|:|:...| |::|..  ..||....:..|...:      ..|:.
 Frog   118 --GQNL-------SVHSGRYRSIVDLVKG-WYDERQ--HYSFPHPRECNPSCPNKCTGAVCTHYT 170

  Fly   184 ELSVDKNFAVGCSIMRFTRPDYPSVYIYN--------FICNYASLYA--LGAPVYETGRAASRCT 238
            ::....:..:||::...|     ::.::.        .:||| |:..  :|...|:.||..|.|.
 Frog   171 QMVWASSNRIGCAVNICT-----NINVWGSTWRQASYLVCNY-SIKGNWIGEAPYKLGRPCSACP 229

  Fly   239 TGKSHFYPGLCS 250
            ..    |.|:||
 Frog   230 PS----YGGVCS 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 CAP_euk 63..218 CDD:349399 41/169 (24%)
r3hdmlXP_017953344.1 CAP_R3HDML 63..208 CDD:349409 42/170 (25%)

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