DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and glipr2

DIOPT Version :9

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001107504.1 Gene:glipr2 / 100135358 XenbaseID:XB-GENE-5758336 Length:441 Species:Xenopus tropicalis


Alignment Length:165 Identity:37/165 - (22%)
Similarity:66/165 - (40%) Gaps:31/165 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DVSRHKADFLHAHNKRRNFLALGKVPGYYPAARMATMVWDDELQYLSMLNTRTCKLDHDDCHNTY 122
            ::...:.|.|..||:.|.....|       |.:::..:..|..::...|..:.. |.:.|.|:  
 Frog   292 ELKSFRKDLLSEHNQYRKLHGAG-------ALQLSVALSQDAQKWADHLVGKPA-LQNSDTHH-- 346

  Fly   123 RYANSGQNLCAVWRPRSPHVNVTSLV--EECLGLWFNEFDLIDSSFIDSFKVTPIFED-YGHFAE 184
                 |:||...|...      |||.  :|....|:||    ::.:  || .||.|:. .|:|.:
 Frog   347 -----GENLWYRWETN------TSLPTGKEVAESWYNE----NAKY--SF-ATPGFQSGSGNFTQ 393

  Fly   185 LSVDKNFAVGCSIMRFTRPDYPSVYIYNFICNYAS 219
            :....:..||..:....:..|.:|..|:...|.|:
 Frog   394 MIWKSSSQVGFGLSTDNKGMYIAVGFYDPAGNIAN 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 SCP_euk 63..218 CDD:240180 36/157 (23%)
glipr2NP_001107504.1 SCP <3..69 CDD:294090
SCP_GAPR-1_like 118..249 CDD:240182
SCP_GAPR-1_like 295..426 CDD:240182 35/158 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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