DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9822 and vap-2

DIOPT Version :9

Sequence 1:NP_611581.1 Gene:CG9822 / 37440 FlyBaseID:FBgn0034623 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001300377.1 Gene:vap-2 / 181273 WormBaseID:WBGene00011462 Length:507 Species:Caenorhabditis elegans


Alignment Length:323 Identity:71/323 - (21%)
Similarity:103/323 - (31%) Gaps:109/323 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEYGRFQTVGCLLIILGMASS---------------------------------QPLSWC----- 27
            |..|:...|||..|:.|...|                                 .|.|.|     
 Worm   225 MAKGKTYRVGCSYIMCGDGESALFTCLYNEKAQCEKEMIYENGKPCCEDKDCFTYPGSKCLVPEG 289

  Fly    28 ---DPDLCPDNTVHIACNNDGKFHESCSPDATMVDLKPYRKLIVNEHNKRRNYIASG-------- 81
               .|.:..|:.....|:|      |...|.|       |...:.:||..|:.:|.|        
 Worm   290 LCQAPSMVKDDGGSFQCDN------SLVSDVT-------RNFTLEQHNFYRSRLAKGFEWNGETN 341

  Fly    82 -SLPGYYPATRMATMVWDEELEYLATLNLKTCYLEHDDCHNSYRFRNLGQNL-----CGVDRRRN 140
             |.|   .|::|..|.:|..||..|......|...| ..|  |...|.||||     ...|.|  
 Worm   342 TSQP---KASQMIKMEYDCMLERFAQNWANNCVFAH-SAH--YERPNQGQNLYMSSFSNPDPR-- 398

  Fly   141 WDLNVTNLVEQSMGLWFGEHKLIDSSYITDFKLTKDL-----EKYGHFVETVLDRNTHVGCAMMR 200
                  :|:..::..|:.|  |.:.....|..||.:|     :..||:.:...||...:||.:..
 Worm   399 ------SLIHTAVEKWWQE--LEEFGTPIDNVLTPELWDLKGKAIGHYTQMAWDRTYRLGCGIAN 455

  Fly   201 FTNPQYPFLYIYNTACNYA--------SVYAIGVPVYNAGKPASECRTGSNPE-YPALCSIKE 254
            .....|       ..|:|.        .:|.||.|.    :...:|..|::.| ..:||.|.:
 Worm   456 CPKMSY-------VVCHYGPAGNRKNNKIYEIGDPC----EVDDDCPIGTDCEKTTSLCVISK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9822NP_611581.1 SCP_euk 64..219 CDD:240180 42/173 (24%)
vap-2NP_001300377.1 SCP 104..253 CDD:214553 8/27 (30%)
SCP 315..468 CDD:214553 44/182 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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