DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9822 and R3hdml

DIOPT Version :10

Sequence 1:NP_611581.1 Gene:CG9822 / 37440 FlyBaseID:FBgn0034623 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_001092801.1 Gene:R3hdml / 100043899 MGIID:3650937 Length:253 Species:Mus musculus


Alignment Length:242 Identity:60/242 - (24%)
Similarity:84/242 - (34%) Gaps:74/242 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PDATMVDLKPYRKLI-------VNEHNKRRNYIA--SGSLPGYY---------PATRMATMVWDE 99
            |:.|:|..:|....:       |..|.::|:..|  ..:|..|:         ||..|..|||||
Mouse    27 PNTTLVQGRPKNTAVWPLSGLGVPRHRRKRHISARDMSALLDYHNHIRASVHPPAANMEYMVWDE 91

  Fly   100 ELEYLATLNLKTCYLEHDDCHNSYRFRNLGQNL--------CGVDRRRNWDLNVTNLVEQSMGLW 156
            :|...|......|...|..   |...:.:||||        ..||..|:|               
Mouse    92 QLARSAEAWATQCIWTHGP---SQLMKYVGQNLSIHSGRFRSVVDLVRSW--------------- 138

  Fly   157 FGEHKLIDSSYITDFKLTKDLEKY----------GHFVETVLDRNTHVGCAMMR------FTNPQ 205
             .|.|...|     |...||...:          .|:.:.|...::.:|||:..      :.|..
Mouse   139 -SEEKRHYS-----FPAPKDCTPHCPWLCSGPVCSHYTQMVWASSSRLGCAINTCSSINVWGNTW 197

  Fly   206 YPFLYIYNTACNYA-SVYAIGVPVYNAGKPASECRTGSNPEYPALCS 251
            ...:|:   .|||| ....||...|.||||.|.|    .|.|...|:
Mouse   198 QQAVYL---VCNYAIKGNWIGEAPYKAGKPCSAC----PPSYQGNCN 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9822NP_611581.1 CAP_euk 64..219 CDD:349399 42/196 (21%)
R3hdmlNP_001092801.1 CAP_R3HDML 63..208 CDD:349409 38/171 (22%)

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