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Protein Alignment NCR3LG1 and Sirpa

DIOPT Version :9

Sequence 1:	NP_001189368.1	Gene:	NCR3LG1 / 374383	HGNCID:	42400	Length:	454	Species:	Homo sapiens
Sequence 2:	NP_001277948.1	Gene:	Sirpa / 19261	MGIID:	108563	Length:	513	Species:	Mus musculus

Alignment Length:	377	Identity:	75/377 - (19%)
Similarity:	125/377 - (33%)	Gaps:	140/377 - (37%)

- Green bases have known domain annotations that are detailed below.

Human    22 TEGDLKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQ 86
            |:.:..|.:.||        |:..:.|.:....|:.    .|.|:  .......:.::.|.|::.
Mouse    37 TQPEKSVSVAAG--------DSTVLNCTLTSLLPVG----PIRWY--RGVGPSRLLIYSFAGEYV 87

Human    87 EAFRPGAIVSPWRLKSGDASLRLPGIQLEEAGEYRC-------EVVVTPLKAQGTVQLEV----- 139
            ...|  .:....:..:.|.|:|:..:...:||.|.|       ....|.:::.|..::.|
Mouse    88 PRIR--NVSDTTKRNNMDFSIRISNVTPADAGIYYCVKFQKGSSEPDTEIQSGGGTEVYVLAKPS 150

Human   140 ---VASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIE------------ 189
               |:.||.|      |:.:.:..:.|:|.||.|..|.:.|.|..|:. ||:|
Mouse   151 PPEVSGPADR------GIPDQKVNFTCKSHGFSPRNITLKWFKDGQEL-HPLETTVNPSGKNVSY 208

Human   190 --------------------------------------ISEDVITGPTI---------------- 200
                                                  :|..:...||:
Mouse   209 NISSTVRVVLNSMDVNSKVICEVAHITLDRSPLRGIANLSNFIRVSPTVKVTQQSPTSMNQVNLT 273

Human   201 -------------------------------KNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHAS 234
                                           ||.|||:|.||...:|||......|:.|.|:|..
Mouse   274 CRAERFYPEDLQLIWLENGNVSRNDTPKNLTKNTDGTYNYTSLFLVNSSAHREDVVFTCQVKHDQ 338

Human   235 LHTPLRSNFTLTAARHSLSETEKT--DNFSIHWWPISFIGVGL--VLLIVLI 282
            .....|::..|..|..|...:.:|  ||.:.|.|.: |||||:  .||:||:
Mouse   339 QPAITRNHTVLGFAHSSDQGSMQTFPDNNATHNWNV-FIGVGVACALLVVLL 389

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.