DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30394 and Slc38a6

DIOPT Version :9

Sequence 1:NP_611578.1 Gene:CG30394 / 37437 FlyBaseID:FBgn0050394 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001013117.1 Gene:Slc38a6 / 299139 RGDID:1310330 Length:457 Species:Rattus norvegicus


Alignment Length:428 Identity:97/428 - (22%)
Similarity:184/428 - (42%) Gaps:55/428 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VMTLANSIIGVGILAMPFCFQKCGILLSIVLLVLSNGITRVCCHYLIKTSLLTRRRSFEMLGLHA 72
            |..:.|:|:|.|||.:.:.....|||....||:|...:.....|.|:...:.|...|:|.|||.|
  Rat    52 VFNVMNAIMGSGILGLAYVMANTGILGFSFLLLLVALLASYSVHLLLAMCIHTAVTSYEDLGLFA 116

  Fly    73 FGTSGKLLVELCIIGYLIGTCITYFVVVGDLGPQIIAKIFALDVADHLHL-RSLVMVVVTVVCIV 136
            ||..||::|...||...||...:|.:::....|..|:::...|.:...:| ..::::::.|..:.
  Rat   117 FGLPGKVVVAGTIIIQNIGAMSSYLLIIKTELPAAISEVLPSDHSGAWYLDGQMLLIIICVGIVF 181

  Fly   137 PLGMLRNVDSLSAVCTASIGFYVCLILKIVLE--AQP-HITAN-------------DWTEKVLYW 185
            ||.:|..:..|....:.|..|.|...|.:|::  |.| .:|.|             |...|:.::
  Rat   182 PLSLLPKIGFLGYTSSLSFFFMVFFALVVVIKKWAVPCPLTLNCINAVFQISNATDDCKPKLFHF 246

  Fly   186 EPAGVLQCLPIFSMALSCQMQLFEVFESINNQSLDKLNGIVRNATWICTFVYISVGFFGYVAFCT 250
            ....| ..:|..:.:..|...:..::..:.:.|..::..:...|..:...||.....|||:.|..
  Rat   247 SKESV-YAIPTMAFSFLCHTSVLPIYCELRSPSKKRMQNVTNTAIALSFLVYFVSALFGYLTFYD 310

  Fly   251 HTFSGNILVNLSTSFGSD----IIKIGFVLSIAFSFPLVIFPCRASLYSLLYRKGHTESSSYIPE 311
            ...| .:|...|.....|    .:|:..:.::..:.||:.||.|.:|..:|:       |:| |.
  Rat   311 KVES-ELLQGYSKYLPHDAAVMAVKLCILFAVLLTVPLIHFPARKALMMILF-------SNY-PF 366

  Fly   312 Q--RFRFITIFIVVFSLCVALVIPSVELIIGLVGSTIGVAICIMFPASSFRKIIKKESMERTLAQ 374
            .  |....|:.:.:..:.:|:.:|.:..:.|:||::....:..:||...:.|:.:::        
  Rat   367 SWIRHSLTTLALNIIIVLLAIYVPDIRNVFGVVGASTSTCLIFVFPGLFYLKLSRED-------- 423

  Fly   375 FVFVSGFLLMILGTYANLSAIDEKSSGP---EFDMVAI 409
                  ||     ::..|.|:...|:|.   .|.:|.|
  Rat   424 ------FL-----SWKKLGALSLLSTGTVVGSFSLVLI 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30394NP_611578.1 SdaC 8..392 CDD:223884 90/406 (22%)
SLC5-6-like_sbd 8..390 CDD:294310 90/404 (22%)
DUF4775 <394..652 CDD:292620 6/19 (32%)
YukC <561..660 CDD:295067
Slc38a6NP_001013117.1 SLC5-6-like_sbd 45..452 CDD:294310 97/428 (23%)
SdaC 45..447 CDD:223884 95/423 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.