DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30394 and avt5

DIOPT Version :10

Sequence 1:NP_611578.1 Gene:CG30394 / 37437 FlyBaseID:FBgn0050394 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_595211.1 Gene:avt5 / 2540081 PomBaseID:SPBC1685.07C Length:420 Species:Schizosaccharomyces pombe


Alignment Length:408 Identity:114/408 - (27%)
Similarity:194/408 - (47%) Gaps:34/408 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VMTLANSIIGVGILAMPFCFQKCGILLSIVLLVLSNGITRVCCHYLIKTS--LLTRRRSFEMLGL 70
            |:.|||:|:|.|||::|..|.|.|:|...:.:|.|...:.:..:::.:.:  |...:.||..:..
pombe    25 VINLANTILGAGILSLPNAFTKTGLLFGCLTIVFSAFASFLGLYFVSQCAARLPRGKASFAAVAK 89

  Fly    71 HAFGTSGKLLVELCIIGYLIGTCITYFVVVGDLGPQIIAKIFALDVADHLHLRSLVMVVVTVVCI 135
            |.| .|..::.:..|.....|..::|.|:||||.|||..   :|.::..:.||....:|..:..:
pombe    90 HTF-PSLAVVFDASIAVKCFGVAVSYLVIVGDLMPQIAP---SLGLSSPMFLRRQTWIVFALFVL 150

  Fly   136 VPLGMLRNVDSLSAVCTASIGFYVCLILKIVLEAQPHITANDWTE-KVLYWEPA---GVLQCLPI 196
            .||..|:.:|||......|: ..:|.::.|||.   |....|..: ::.|:.|.   |.|..||:
pombe   151 TPLSFLKRLDSLRHTSVISL-IALCYLVFIVLY---HFIIGDTVKGEIRYFVPESGFGYLSVLPV 211

  Fly   197 FSMALSCQMQLFEVFESINNQSLDKLNGIVRNATWICTFVYISVGFFGYVAFCTHTFSGNILVNL 261
            |....:|....|.|...:.|.|...:|..:..|....|.:|:.|...||::|.: ..||||:...
pombe   212 FVFGFTCHQNAFSVINEVRNFSQGFVNFTMFTAIISSTLLYLLVAITGYLSFGS-LASGNIIAMY 275

  Fly   262 -STSFGSDIIKIGFVLSIAFSFPLVIFPCRASLYSLLYR--KGHTESSSYIPEQRFRFITIFIVV 323
             :||......|:..|:.:.||:||...|||.|:|..:.|  ..|..|..|     ...||:.|::
pombe   276 DNTSIWIIGGKLAIVVLVLFSYPLQCHPCRNSVYQAIRRSYSAHDMSDGY-----HAVITLCILL 335

  Fly   324 FSLCVALVIPSVELIIGLVGSTIGVAICIMFPASSFRKIIKKES-----------MERTLAQFVF 377
            |:..:||::.|:|:::..||||....|..:.|.|.:.....|.:           :.|..|..:.
pombe   336 FTHSLALLLSSLEMVLAFVGSTGSTFISFILPGSLYYFFSHKVASPGNSSPLQLRISRAFAAGLA 400

  Fly   378 VSGFLLMILGTYANLSAI 395
            :.|.::|||....|::.:
pombe   401 IYGTVVMILCLNINIAKL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30394NP_611578.1 SLC5-6-like_sbd 8..390 CDD:444915 113/401 (28%)
half-pint <389..>602 CDD:130706 1/7 (14%)
PTZ00121 <561..823 CDD:173412
avt5NP_595211.1 SLC5-6-like_sbd 17..409 CDD:444915 111/397 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.