DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30394 and Y4C6B.2

DIOPT Version :9

Sequence 1:NP_611578.1 Gene:CG30394 / 37437 FlyBaseID:FBgn0050394 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001370721.1 Gene:Y4C6B.2 / 189355 WormBaseID:WBGene00021156 Length:484 Species:Caenorhabditis elegans


Alignment Length:483 Identity:94/483 - (19%)
Similarity:168/483 - (34%) Gaps:158/483 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GVGILAMPFCFQKCGILLSIVLLVLSNGITRVCCHYLIKTSLLTR-----------------RRS 64
            |.|::|:|......|.:....||:    :..|.|.|   |.:|..                 |:.
 Worm    26 GGGLIALPTAIVSTGAVTGAFLLL----VAAVVCTY---TGILLAENWTILQELYPEYRDHCRKP 83

  Fly    65 FEMLGLHAFGTSGKLLVELCIIGYLIGTCITYFVVVGDLGPQIIAKIFALDVADHLHLRSLVMVV 129
            :..:||.|.|......|...:.....||.:.:.::....|..::...|.      .|:....|::
 Worm    84 YPAMGLRAIGPKFAHFVSAMLQVTQFGTAVVFVLLAAKNGENMLHANFG------THVSFCYMIL 142

  Fly   130 VTVVCIVPLGMLRN-VDSLSAVCTASIGFYVCLILKIVLEAQPHITANDWTEKVLYWEPAGVLQC 193
            :..:.:.|..:.:: .|...||..|.|...:.::|.|.                      |.:|.
 Worm   143 IVGLLVFPFTLPKSPKDFWYAVVAAMISTTISVVLIIF----------------------GTVQD 185

  Fly   194 LPIFSMALSCQMQLFEVFESINNQSLDKLNGIVRNATWICTFVYISVGFFGYVAFCT-------- 250
            ..:      |..::|  :.|.|....            :.:|..|...:.|:.||.|        
 Worm   186 YEV------CHKEVF--YPSFNFSKT------------LMSFGTIMFSYGGHCAFPTIQHDMKKP 230

  Fly   251 HTFSGNILVNLSTSFGSDIIKIGFVLSIAFSFPLVIFPCRASLYSLLYRKGHTESSSYIPE-QRF 314
            |.||.:|:             |.|::...|..|:.:        |..:..|.:.:.|.||. |..
 Worm   231 HHFSRSII-------------IAFIIIFIFYLPVSM--------SGYFVYGSSLTDSIIPSIQNI 274

  Fly   315 RFITIFIVVFSLCVALVIPSVELIIGLVGSTIGVAICIMF-PAS-SFRKIIKKE---SMERTLAQ 374
            ...||..::.||.|:|                  |:.|.| |.: .|.:|:...   ..:|.:|:
 Worm   275 NIQTIVNILISLHVSL------------------ALTITFNPLNQEFEEILNMSHDFGWQRIVAR 321

  Fly   375 ------FVFVS------GFLLMILGTYANLSAIDEKSSGPEFDMVAIGTPLYPDGQVPAVVGELP 427
                  .|||:      |.||.::|             |....|:|:..|:..:..:..:..:  
 Worm   322 ALVMLSVVFVAESVPNFGVLLDLVG-------------GSTITMMALVVPIVFNLALTTI
KKK-- 371

  Fly   428 KHLAKESIDSEKNLLLKKLDVQNPDKLK 455
                ||:.|:|:.|.:|:: .||.||:|
 Worm   372 ----KENKDNEEKLTIKEI-FQNSDKIK 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30394NP_611578.1 SdaC 8..392 CDD:223884 79/418 (19%)
SLC5-6-like_sbd 8..390 CDD:294310 79/416 (19%)
DUF4775 <394..652 CDD:292620 15/62 (24%)
YukC <561..660 CDD:295067
Y4C6B.2NP_001370721.1 SLC5-6-like_sbd 9..368 CDD:382020 83/448 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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