DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30394 and skat-1

DIOPT Version :9

Sequence 1:NP_611578.1 Gene:CG30394 / 37437 FlyBaseID:FBgn0050394 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_498989.1 Gene:skat-1 / 176271 WormBaseID:WBGene00010307 Length:460 Species:Caenorhabditis elegans


Alignment Length:449 Identity:101/449 - (22%)
Similarity:184/449 - (40%) Gaps:85/449 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VMTLANSIIGVGILAMPFCFQKCGILLSIVLLVLSNGITRVCCHYLIKTSLLTRRRSFEMLGLHA 72
            |:||:.|:...|..::|:.::..|:.:|.|:..:..|:.....|.|::.|....::| :...|. 
 Worm    43 VLTLSKSMFNAGCFSLPYAWKLGGLWVSFVMSFVIAGLNWYGNHILVRASQHLAKKS-DRSALD- 105

  Fly    73 FGTSGKLLVELCIIGYLIGT--CITYFVVVG----DLGPQIIAKIFALD-----VADHL----HL 122
            :|...|.:.:...|.:|...  .:.|||.|.    .||...:|.:|..|     |.|||    |.
 Worm   106 YGHFAKKVCDYSDIRFLRNNSKAVMYFVNVTILFYQLGMCSVAILFISDNLVNLVGDHLGGTRHQ 170

  Fly   123 RSLVMVVVTVVCIVPLGMLRNVDSLSAVCTASIGFYV---CLILKIVLEAQPHITANDWTEKVLY 184
            :.::|..|::..|:...|...:..:|.....|..|:|   .:|::..:: ||    |.|.:....
 Worm   171 QMILMATVSLFFILLTNMFTEMRIVSFFALVSSVFFVIGAAVIMQYTVQ-QP----NQWDKLPAA 230

  Fly   185 WEPAGVLQCLPIFSMALSCQMQLFEVFESINNQSLDKLN-GIVRNATWICTFVYISVGFFGYVAF 248
            ....|.:..:.:...|...|..:..:...::|.:..... |::.....|||....::|||||..|
 Worm   231 TNFTGTITMIGMSMYAFEGQTMILPIENKLDNPAAFLAPFGVLSTTMIICTAFMTALGFFGYTGF 295

  Fly   249 ---CTHTFSGNI-------LVN----LSTSFGS--------DIIKIGFVLSIAFSFPLVIFPCRA 291
               ...|.:.|:       .||    |.:..|:        |:...||.......||.|      
 Worm   296 GDSIAPTITTNVPKEGLYSTVNVFLMLQSLLGNSIAMYVVYDMFFNGFRRKFGARFPNV------ 354

  Fly   292 SLYSLLYRKGHTESSSYIPEQRFRFITIFIVVFSLCVALVIPSVELIIGLVGSTIGVAICIMFPA 356
                          ..::.::.||   :|.|:.:..:|::||.:|::|.|||.|.|....::|| 
 Worm   355 --------------PKWLSDKGFR---VFWVLVTYLMAVLIPKLEIMIPLVGVTSGALCALIFP- 401

  Fly   357 SSFRKIIK-----------KESMERTLAQFVFVS-GFLLMILGTYANLSAIDEKSSGPE 403
             .|.::|.           ::.|.:.....|.:: |...:|.|.|.|:.||.:..|.|:
 Worm   402 -PFFEMITFWTDWKGLLTYRQRMTKIFINLVVMAIGVFAIIAGVYTNIHAIIQSFSQPD 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30394NP_611578.1 SdaC 8..392 CDD:223884 96/436 (22%)
SLC5-6-like_sbd 8..390 CDD:294310 95/434 (22%)
DUF4775 <394..652 CDD:292620 4/10 (40%)
YukC <561..660 CDD:295067
skat-1NP_498989.1 Aa_trans 35..446 CDD:279788 95/434 (22%)
SdaC 40..448 CDD:223884 96/436 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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