DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30394 and Y18D10A.23

DIOPT Version :9

Sequence 1:NP_611578.1 Gene:CG30394 / 37437 FlyBaseID:FBgn0050394 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_493251.1 Gene:Y18D10A.23 / 173155 WormBaseID:WBGene00012487 Length:503 Species:Caenorhabditis elegans


Alignment Length:415 Identity:76/415 - (18%)
Similarity:155/415 - (37%) Gaps:123/415 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 HSAH-------VMTLANSIIGVGILAMPFCFQKCGILLSIVLLVLS---NGIT------------ 46
            |::|       .:.:...::|.|::::|....:.|::...||::|:   :|.|            
 Worm    34 HNSHGISWLMAAVFIVGDMMGAGMISLPLALGRSGLIAGCVLILLASIFSGYTGIQLGENWEMMQ 98

  Fly    47 ------RVCCHYLIKTSLLTRRRSFEMLGLHAFGTSGKLLVELCII--GYLIGTCITYFVVVGDL 103
                  |..|           ||.:..:...|.|...:.:|.:|::  .:|| .|:...      
 Worm    99 IRWPKYRTHC-----------RRPYPEMAYRALGNWARQVVAVCLVVSQFLI-ACVLLL------ 145

  Fly   104 GPQIIAKIFA--LDVADHLHLRSLVMVVVTVVCIVPLGMLRN---------VDSLSAVCTASIGF 157
               |.|:.|.  |:...||||...|.:|...:.:.|..:|::         :.::|:...|.:  
 Worm   146 ---ISAENFTNLLNTFFHLHLDFCVFIVAIALVLWPFSLLQSPMDFWQLAVISAVSSTIAAGL-- 205

  Fly   158 YVCLILKIVLEAQPHITANDWTEKVLYWEPAGVLQCLPI----------FSMALSCQMQLF---E 209
                   ||..|.              |:   :..|:|.          |::|....:..|   .
 Worm   206 -------IVFGAS--------------WD---MTSCVPYRQMPSLEAKQFTLAYGTIVFAFGGHG 246

  Fly   210 VFESINNQSL--DKLNGIVRNATWICTFVYISVGFFGYVAFCTHTFSGNILVNLSTSFGSDIIKI 272
            .|.:|.:...  .:.|..|.::..:.|.||::|...|.:|: ..:....::.::..::.:..|.|
 Worm   247 AFPTIQHDMAMPHQFNKSVISSYILITLVYLAVSITGLIAY-GDSMIDTVIPSIQLTWVAQTINI 310

  Fly   273 GFVLSIAFSFPLVIFPCRASLYSLLYRKGHTESSSYIPEQ------RFRFITIFIVVFSLCVALV 331
            .....|..:..:|:.|....:          |....||.|      ..|...:|:|:|:   ||.
 Worm   311 LITAHILPTIIIVLSPLSQQV----------EEWIKIPNQFGCRRVLVRTFILFLVMFT---ALS 362

  Fly   332 IPSVELIIGLVGSTIGVAICIMFPA 356
            :..:.|.:.|||:|....:.::.|:
 Worm   363 VLKLGLFLDLVGATTITLMTMLLPS 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30394NP_611578.1 SdaC 8..392 CDD:223884 74/404 (18%)
SLC5-6-like_sbd 8..390 CDD:294310 74/404 (18%)
DUF4775 <394..652 CDD:292620
YukC <561..660 CDD:295067
Y18D10A.23NP_493251.1 SLC5-6-like_sbd 37..391 CDD:382020 75/412 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.