DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9485 and ygjK

DIOPT Version :10

Sequence 1:NP_726062.2 Gene:CG9485 / 37435 FlyBaseID:FBgn0034618 Length:1629 Species:Drosophila melanogaster
Sequence 2:NP_417551.1 Gene:ygjK / 947596 ECOCYCID:G7599 Length:783 Species:Escherichia coli


Alignment Length:832 Identity:160/832 - (19%)
Similarity:273/832 - (32%) Gaps:247/832 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   912 PNVINGFTQFQLNLQEHIPLAKSTVFQTQAYSDGNNTELNF-ANLRPGTVVA------IRVSM-- 967
            ||.:.||....|..:|:|....|...:...:.||...:... |...||.:|.      ::|.|  
E. coli    70 PNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVEMTL 134

  Fly   968 -HPGPRTSF--DKLQKISAALRIGSGEEYSQLQAIVSK-LDLVALSGALFSCDDEERDL------ 1022
             ...||||.  .|:........:..||...:|:|...| |....::|   ...|.:|.:      
E. coli   135 RFATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIAG---EYPDYQRKISATRDG 196

  Fly  1023 -----GKGGTAYDIPNFGKIVYCGLQGFISLLTEISPKNDLGHPLCNNLRDGNWMMD--YISDRL 1080
                 ||....:|:...|:..| .:...:.:.|||               :||....  :|:...
E. coli   197 LKVTFGKVRATWDLLTSGESEY-QVHKSLPVQTEI---------------NGNRFTSKAHINGST 245

  Fly  1081 TSYEDLKPLSAWFKATFEPLKNIPRYLIPCYFDAIVSGVYNVLINQVNELMPDFIKNGHSFPQSL 1145
            |.|.....|....:.:.|.::.......|.::           :....:...:::|.|.:.|.:.
E. coli   246 TLYTTYSHLLTAQEVSKEQMQIRDILARPAFY-----------LTASQQRWEEYLKKGLTNPDAT 299

  Fly  1146 ALSTLQFLSVCKSAN----LPGFSPALSPPKPPKQCVTLSAGLPHFSTGYMRCWGRDTFIALRGS 1206
            ...|...:...::.|    .||.:...:       .||.|.....||..  :.|..||:    ..
E. coli   300 PEQTRVAVKAIETLNGNWRSPGGAVKFN-------TVTPSVTGRWFSGN--QTWPWDTW----KQ 351

  Fly  1207 MFLTGRYN------EARFII---IGFGQTLRH---GLIPNLL----------DSGSKPRFNCRDA 1249
            .|....:|      ..|.:.   |..|.::|.   |.:|:|:          |.|:....|.:.:
E. coli   352 AFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPS 416

  Fly  1250 IWWWMYCIKQYVEDAPKGAEILKDK--VSRIFP----YDD-----ADAHAPGAFD---------- 1293
            :..|. .::.|        .:.:||  |:.::|    |.|     .|.:..|..:          
E. coli   417 LAAWS-VMEVY--------NVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHN 472

  Fly  1294 ----QLLFDVMQEALQVHFQGLQYRERNAGYEIDAHMVDQG------FNNQIGIHPETG----FV 1344
                ::||.|.:.         ...|..:|....|.:|::|      ...|:....|:|    .|
E. coli   473 TESGEMLFTVKKG---------DKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAV 528

  Fly  1345 FGGNNFNCGTWMDKMGSSQKAGNKGRPSTPRDGSAVELVGLQYAVLRFMQSLAEKEVIPYTGVER 1409
            ||        ::||....:...|.|:.|.              ..::|              .|.
E. coli   529 FG--------FIDKEQLDKYVANGGKRSD--------------WTVKF--------------AEN 557

  Fly  1410 KGPSGEVTKWS-YKEWADRIKNNFDKYFFVSESETCSVANKKLIYKDSYGATQSWTDYQLRCNFP 1473
            :...|.:..:| .:|..|:....:....:::|..|  :..|....|......|...||...|.|.
E. coli   558 RSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMAT--ILGKPEEAKRYRQLAQQLADYINTCMFD 620

  Fly  1474 ITLTVAPD-------LCNPQNAWRALERAKKYLLGPLG-----------------MKTM-DPEDW 1513
            .|.....|       |.|.......:||.|    ||.|                 :|.| ||:::
E. coli   621 PTTQFYYDVRIEDKPLANGCAGKPIVERGK----GPEGWSPLFNGAATQANADAVVKVMLDPKEF 681

  Fly  1514 NYRANYDNSNDSTDCTVAHGAN-YHQGPEWVWPIGFYLRARLIFAKKCGHLDET--IAETWAILR 1575
            |   .:.....:.....|.||: |.:|..||....|.|:.    .::.|:.|:.  :|:|:    
E. coli   682 N---TFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKG----MERYGYRDDALKLADTF---- 735

  Fly  1576 AHLRELQTSHWRGL----PELTNDN---GSYCGDSCRTQAWSVAAILEVLYD 1620
                   ..|.:||    |...|.|   |:..|  ....:|| ||.|.:||:
E. coli   736 -------FRHAKGLTADGPIQENYNPLTGAQQG--APNFSWS-AAHLYMLYN 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9485NP_726062.2 RNA_pol_I_A49 <30..>76 CDD:462024
glyc_debranch 112..1621 CDD:273673 160/832 (19%)
ygjKNP_417551.1 PRK10137 1..782 CDD:236653 160/832 (19%)
Blue background indicates that the domain is not in the aligned region.

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