DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arms and Ank

DIOPT Version :10

Sequence 1:NP_726059.5 Gene:Arms / 37433 FlyBaseID:FBgn0261554 Length:1642 Species:Drosophila melanogaster
Sequence 2:NP_787122.1 Gene:Ank / 43770 FlyBaseID:FBgn0011747 Length:1549 Species:Drosophila melanogaster


Alignment Length:1416 Identity:308/1416 - (21%)
Similarity:502/1416 - (35%) Gaps:430/1416 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 AAEGKSSPAPNQEHEEHS-----NQSPSRRFS-HFNLALRRFSHIHAHNINRFGDSMGSLGH--- 170
            ||:|        ||:|.:     |::|....: .:..||    |:.||           .||   
  Fly   340 AAQG--------EHDEAAHLLLDNKAPVDEVTVDYLTAL----HVAAH-----------CGHVKV 381

  Fly   171 -RALLQYIDNNDISGLRA-----------------ILDSRHLTIDDRDENATTVLMVVAGRGLTA 217
             :.||.|..|.:...|..                 :|......|....|:..|.|.|.:..|...
  Fly   382 AKLLLDYKANPNARALNGFTPLHIACKKNRIKMVELLIKHGANIGATTESGLTPLHVASFMGCIN 446

  Fly   218 FVREFLARGADVQAEDLDNWTALLCASRNGHLDVVQLLLDHGAEVEHRDMGGWTSLMWAAYRGHT 282
            .|...|...|......:...|.|..|:|....|::::|| ..|:|:.....|.|.|..|:..|:.
  Fly   447 IVIYLLQHEASADLPTIRGETPLHLAARANQADIIRILL-RSAKVDAIAREGQTPLHVASRLGNI 510

  Fly   283 ELVRLLLDKGADGNAHGNYHLGALLWAAGRGYKDIVELLVQRGAKVNVGDKYGTTALVWACRRGN 347
            .::.|||..||:.||..|....||..||..|.::||::|::.||:.|...|.|.|.|..||:.|.
  Fly   511 NIIMLLLQHGAEINAQSNDKYSALHIAAKEGQENIVQVLLENGAENNAVTKKGFTPLHLACKYGK 575

  Fly   348 VEIVDTLLKAGANVDTAGMYSWTPLLVAAAGGHTDCVSSILEKKPNVNALDKDGMTALCIASREG 412
            ..:|..||:.||::|..|....|||.||....:...|..:|:...:.|...::|..|:.||.::.
  Fly   576 QNVVQILLQNGASIDFQGKNDVTPLHVATHYNNPSIVELLLKNGSSPNLCARNGQCAIHIACKKN 640

  Fly   413 FQDIAASLIAAGAYINI-------------QDRGAD-------------------TPLIHAVKAG 445
            :.:||..|:..||.:||             |....|                   |||..|.:.|
  Fly   641 YLEIAMQLLQHGADVNIISKSGFSPLHLAAQGGNVDMVQLLLEYGVISAAAKNGLTPLHVAAQEG 705

  Fly   446 HRTVVEALLKKHADVDIQGKDRKTAIYTAVEKGHTPIVKLLLATNPDLESATKDGDTPLLRAVRN 510
            |..|.:.||:..|::..:.::..|.::.|...||..:||..:..:.|:|.::..|.|||.:|.:.
  Fly   706 HVLVSQILLEHGANISERTRNGYTPLHMAAHYGHLDLVKFFIENDADIEMSSNIGYTPLHQAAQQ 770

  Fly   511 RNLEIVHLLLDRKAKVTASDKRGDTCLHIAMRARSKTIVEALLRNPKHSQLLYRANKAGE----- 570
            .::.|::|||..||...|..|.|:|.||||......|::|:|......|.:........|     
  Fly   771 GHIMIINLLLRHKANPNALTKDGNTALHIASNLGYVTVMESLKIVTSTSVINSNIGAIEEKLKVM 835

  Fly   571 TPYNIDSLHQKTILGQVFGARRLNTNEDSEGMLGYELYSSALADVLSEPTLTTPITVGLYAKWGS 635
            ||    .|.|:|:|..       :.:|..:.:|.:..|.....|             .|.|.:|.
  Fly   836 TP----ELMQETLLSD-------SDDESCDDLLDHNHYKYMATD-------------DLKANYGQ 876

  Fly   636 G-KSF-------------LLNK---LRDEMNNFARQWAEPPIRTSGLLFIVCLHVALLIGTIVGL 683
            . |:|             :|||   |.:||:                    |:.:     |.:|.
  Fly   877 DQKNFDTTNTDHDLTDVSVLNKKEILPNEMS--------------------CIEL-----TEIGH 916

  Fly   684 STWSAVVGVSAA-VGFLLLAYLLLAAVRYCNYQMDMQWAYSVQHGLEKRMTR---LRLILQVAFC 744
            ...:.|:..|.. :|| |:::|:.|                  .|...|..|   :|:|:....|
  Fly   917 KPDNVVIARSQVHLGF-LVSFLVDA------------------RGGSMRGYRHNGVRIIVPPKAC 962

  Fly   745 HPPGPQSDSQAKPVRFHFAEANSASP----TGDGAVAHML------AALLDAIE---SHYGWLAT 796
            ..|...:....||.|.       .:|    .|:..|:.:|      ...|..|.   .|||.|..
  Fly   963 AEPTRITCRYVKPQRV-------VNPPPLMEGEALVSRILEMSPVDGMFLSPITLEVPHYGTLRK 1020

  Fly   797 RLYRAFRPKCLKVDVGWRWRRMCCIPIVLIFEL---------ALVTVVTGISLTVAYFTFADEKE 852
            ......   .|:.|.|..||.......::..::         .:|.:||   ..|.:|.....:.
  Fly  1021 NEREII---ILRSDNGESWREHNLYKDIIGEDINQTEEFHSDRIVRIVT---QNVPHFFAVVSRV 1079

  Fly   853 KEHILVALYVIAAVMGTLICTHLHVLAKVF-VSLFTSHIRVLKRAVRSSESAPLTMLGAEVAVMT 916
            ::.:    :||....||:..|.:..:..:| ....|..|||                |.: |...
  Fly  1080 RQEV----HVIGPDGGTVFSTAVPQVKAIFPPHALTKKIRV----------------GLQ-AQSV 1123

  Fly   917 DMVKCLDAFTNQQSRLVGVIDALDSCDTERILTLLNAVQTLLSSPNRPFVLLISVDPHVIAKAAE 981
            |:|:|        |:|:|                    |.:..||      :::|:|.       
  Fly  1124 DLVEC--------SKLLG--------------------QGVAVSP------VVTVEPR------- 1147

  Fly   982 ANSRRLFTEGGIGGHDFLRNLVHLPVYLQNSGLRKVQRAQMTALLFKRSGGGDYQTDDGPTLGHS 1046
               ||.|       |..:...:..|....||.:....            |.|:   ...|||   
  Fly  1148 ---RRKF-------HKAITLSIPAPKACTNSMVNACY------------GNGN---SSSPTL--- 1184

  Fly  1047 VSARRLSNASEIISSQEKLRGPARGGGGKKLRLSESVASSTGSNLHRLGQNPQTVLDLSRIVLTD 1111
               |.|.:.|                ||:.....|.|..||..:..|......|.:. :|..|.|
  Fly  1185 ---RLLCSIS----------------GGQTRATWEDVTGSTPLSFVRDSVTFTTTVS-ARFWLID 1229

  Fly  1112 DYFSDVNPRSMRRLMNVIYITVRLLKA-FQIEFSWY--RLSSWINLTEQWPLRASMIVLHHDQFM 1173
            ..    |.....|:...:|  ..|.|. |.::|..:  |:|       |...:.|:..:     .
  Fly  1230 CR----NIIDAGRMATELY--SHLAKVPFYVKFVIFAKRIS-------QTEAKFSVFCM-----T 1276

  Fly  1174 DSNADESVSLQSVYEKLRPKLAYLREAAPLLELDRDERKLDAFLQLHKSDLLVADLRIFLPFTIN 1238
            |...|:::..|.          |.:|.|...:::..:.::                 ::|.|..|
  Fly  1277 DDKEDKTLEQQE----------YFKEVAKSRDIEVLQNQI-----------------VYLEFAGN 1314

  Fly  1239 LDPYLRKVLKEDQQTIEDEGSLVIQARPSVSNTM--------RQFP-APTTYVPSPQAYPPYQMF 1294
            :.|    :||:.:|       |..:.:|...|.:        ::|| ....::..|...|     
  Fly  1315 IVP----ILKKGEQ-------LYTKFQPFCENRLSFSAHIKDQEFPHGRICFMTYPMVGP----- 1363

  Fly  1295 QNEYPANELRSRNLSTSTEPVT-------------------PLINSPSDSFGDDILQTKLTDLTV 1340
             :|.|...|.:.|:|...:.:|                   .|.::.:..||....|.|..|:|.
  Fly  1364 -DEVPLKPLCTLNISVDFKTITNHLERDNLHSLNDCINAHGKLNHNENIVFGVKEQQVKKIDITK 1427

  Fly  1341 EGVISLLDRIEDMKPALPKLAPVLRENAINGRVLKH--CDMPDLKSVLGLS 1389
            ..::|     .|:|  |...|.|:.::     :..|  .|.|.|.:|||:|
  Fly  1428 ACIMS-----SDIK--LIHEADVILDD-----ICSHLGSDWPLLANVLGVS 1466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArmsNP_726059.5 ANKYR 172..438 CDD:440430 84/314 (27%)
ANK repeat 205..233 CDD:293786 7/27 (26%)
ANK repeat 235..266 CDD:293786 9/30 (30%)
ANK repeat 268..299 CDD:293786 12/30 (40%)
ANK repeat 301..332 CDD:293786 11/30 (37%)
ANKYR 316..598 CDD:440430 89/318 (28%)
ANK repeat 334..362 CDD:293786 11/27 (41%)
ANK repeat 367..398 CDD:293786 8/30 (27%)
ANK repeat 400..431 CDD:293786 11/43 (26%)
ANK repeat 435..464 CDD:293786 11/47 (23%)
ANK repeat 466..497 CDD:293786 8/30 (27%)
ANK repeat 499..530 CDD:293786 12/30 (40%)
KAP_NTPase 605..1136 CDD:462231 105/574 (18%)
SAM_superfamily 1357..1392 CDD:188886 11/35 (31%)
AnkNP_787122.1 ANKYR 20..337 CDD:440430
ANK repeat 72..103 CDD:293786
ANK repeat 105..136 CDD:293786
ANK repeat 138..169 CDD:293786
ANK repeat 204..231 CDD:293786
ANKYR 217..502 CDD:440430 41/185 (22%)
ANK repeat 233..264 CDD:293786
ANK repeat 266..295 CDD:293786
ANK repeat 299..330 CDD:293786
ANK repeat 332..363 CDD:293786 8/30 (27%)
ANK repeat 365..395 CDD:293786 11/44 (25%)
ANK repeat 398..427 CDD:293786 2/28 (7%)
ANK repeat 431..462 CDD:293786 7/30 (23%)
ANK repeat 464..494 CDD:293786 9/30 (30%)
ANK repeat 496..527 CDD:293786 12/30 (40%)
ANKYR 510..797 CDD:440430 87/286 (30%)
ANK repeat 529..560 CDD:293786 11/30 (37%)
ANK repeat 562..590 CDD:293786 11/27 (41%)
ANK repeat 595..625 CDD:293786 8/29 (28%)
ANK repeat 628..657 CDD:293786 9/28 (32%)
ANK repeat 661..691 CDD:293786 2/29 (7%)
ANK repeat 693..724 CDD:293786 10/30 (33%)
ANK repeat 726..755 CDD:293786 7/28 (25%)
ANK repeat 759..788 CDD:293786 11/28 (39%)
ZU5 930..1034 CDD:128514 27/132 (20%)
UPA_2 1250..1378 CDD:375346 30/183 (16%)
Death_ank 1439..1521 CDD:260029 10/33 (30%)
Blue background indicates that the domain is not in the aligned region.

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