Protein Alignment Arms and CG42534

DIOPT Version :10

• Sequence 1: NP_726059.5
• Gene: Arms / 37433
• FlyBaseID: FBgn0261554
• Length: 1642
• Species: Drosophila melanogaster
• Sequence 2: NP_651560.2
• Gene: CG42534 / 43298
• FlyBaseID: FBgn0260487
• Length: 1555
• Species: Drosophila melanogaster
• Alignment Length: 636
• Identity: 154/636 - (24%)
• Similarity: 237/636 - (37%)
• Gaps: 159/636 - (25%)

  Fly    62 HQPLLESEERVIVAVNHRNPRQPHRSYGTER---KPHSSLPRFVINIEEETDAAVAAA----EGK 119
            |.|..|.:|        :..:|..|....::   .|.||         ::||||..||    |..
  Fly    51 HPPQQEKQE--------QQQQQQQRQEAADKVIAMPGSS---------QDTDAAAEAAVDVPETD 98

  Fly   120 SSPAPNQEHEEHSNQSPSRRFSHFNLALRRFSHIHAHNINRFGDSMGSL---------------G 169
            ..||.....:..|:.:.:||    .||....|.::|   .:.||.:..|               .
  Fly    99 PDPAQLTVSQSQSSSTVARR----RLAEGCTSLMYA---CQRGDIVQVLAQMREKPELLRQRDRS 156

  Fly   170 HRALLQYIDNNDISGLRAILDSRHLTI------DDRDENATTVLMVVAGRGLTAFVREFLARGAD 228
            ||..|.|....|..|.:.::.:..:.|      :..||:..|.|.:...:|..|.|...||..||
  Fly   157 HRNALHYCAAQDSEGSKDLVAAASIAIAAPELLESADEDGFTPLHLAVIQGNLAMVNLLLANKAD 221

  Fly   229 VQAEDLDNWTALLCASRNGHLDVVQLLLDHGAEVEHRDMGGWTSLMWAAY--------------- 278
            |.|.|.:..:.:..|:..|.::.::.:|..||.|...|..|.|.|.:||.
  Fly   222 VNAVDNEGHSVVHWATVCGEVESLRAVLAAGASVAKPDANGGTPLHYAAQMCGASKQDSKQQASS 286

  Fly   279 ----RGHTELVRLLL----------DKGADGNAHGNYHLGALLWAAGRGYKDIVELLVQRGAKVN 329
                |...|::.:||          ||  ||..       .|||||..|....|..||:.||:|.
  Fly   287 SNSSRLSLEILGILLSHPQSSVDVQDK--DGRQ-------PLLWAASAGSAKAVIALVKAGARVE 342

  Fly   330 VGDKYGTTALVWACRRGNVEIVDTLL-KAGANVDTAGMYSWTPLLVAAAGGHTDCVSSILEKKPN 393
            ..||.|.|||..|..||:.|.:|||: ..||..|.......|.|..|...||.|..:.:|:.:.:
  Fly   343 SSDKDGLTALHCAGSRGHTECIDTLIGLCGAPTDLIDSNGCTALHYAVTLGHADATARLLDLEAD 407

  Fly   394 VNALDKDGMT-ALCIASREGFQDIAASLIAAGAYINIQDRGADTPLIHAVKAGHRTVVEALL-KK 456
            .|..|:.|.| |.|..|:..|:.:.. |...||.:.:::...|.||..|..:|.|.::|.|| ::
  Fly   408 PNRQDRKGRTPAHCGCSKGQFETLKL-LKERGANLWLRNAKGDLPLHEAAASGRRELLEWLLAQR 471

  Fly   457 HADVDIQGKDRKTAIYTAVEKGHTPIVKLLLATNPDLE--------------------------- 494
            ...|:....|.::.::.|....:|.:.||||....|:.
  Fly   472 PKQVNTTSNDGRSLLHIAAANDYTDMCKLLLDYGADVNAVYRNSRGLVLTPLDGALQRGHRSTAK 536

  Fly   495 ---------------SATKDGD-------TPLLRAVRNRNLEIVHLLLDRKAKVTASDKRGDT-- 535
                           |:.:.|:       |.::|.::....|.:|.|...| |.....||.|:
  Fly   537 FLQANGGQPANKVRLSSRRTGNPFHETNATDMVRPLKYVEKEELHDLRSSK-KYVVYLKRSDSDN 600

  Fly   536 -------------CLHIAMRARSKTIVEALLRNPKHSQLLYRANKAGETPY 573
                         |.......|.:..:..:.|..|..||..|.:..||:.:
  Fly   601 GNENGKADVGDGDCSCSEQTYRKEQRLRHVCRRHKRRQLRRRTSSCGESKH 651

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arms	NP_726059.5	ANKYR	172..438	CDD:440430	86/302 (28%)
		ANK repeat	205..233	CDD:293786	11/27 (41%)
		ANK repeat	235..266	CDD:293786	6/30 (20%)
		ANK repeat	268..299	CDD:293786	13/59 (22%)
		ANK repeat	301..332	CDD:293786	12/30 (40%)
		ANKYR	316..598	CDD:440430	79/325 (24%)
		ANK repeat	334..362	CDD:293786	13/28 (46%)
		ANK repeat	367..398	CDD:293786	8/30 (27%)
		ANK repeat	400..431	CDD:293786	9/31 (29%)
		ANK repeat	435..464	CDD:293786	10/29 (34%)
		ANK repeat	466..497	CDD:293786	9/72 (13%)
		ANK repeat	499..530	CDD:293786	8/37 (22%)
		KAP_NTPase	605..1136	CDD:462231
		SAM_superfamily	1357..1392	CDD:188886
CG42534	NP_651560.2	Ank_2	127..226	CDD:463710	24/101 (24%)
		ANK repeat	195..226	CDD:293786	11/30 (37%)
		ANKYR	209..514	CDD:440430	93/314 (30%)
		ANK repeat	228..259	CDD:293786	6/30 (20%)
		ANK repeat	314..345	CDD:293786	14/37 (38%)
		ANK repeat	347..379	CDD:293786	14/31 (45%)
		ANK repeat	381..412	CDD:293786	8/30 (27%)
		ANK repeat	414..479	CDD:293786	19/65 (29%)
		ANK repeat	419..445	CDD:293786	7/26 (27%)
		ANK repeat	481..511	CDD:293786	8/29 (28%)
		Ank_2	486..572	CDD:463710	11/85 (13%)
		ANK repeat	516..542	CDD:293786	0/25 (0%)