DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arms and Rfxank

DIOPT Version :10

Sequence 1:NP_726059.5 Gene:Arms / 37433 FlyBaseID:FBgn0261554 Length:1642 Species:Drosophila melanogaster
Sequence 2:NP_035396.1 Gene:Rfxank / 19727 MGIID:1333865 Length:269 Species:Mus musculus


Alignment Length:291 Identity:81/291 - (27%)
Similarity:128/291 - (43%) Gaps:48/291 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 EETDAAVAAAEGKSSPAPN-QEHEEHSNQSPSRRFSHFNLALRRFSHIHAHNINRFGDSMGSLGH 170
            |.|..|......:..|.|: ::.|:..::||.   :...:.|..|. .....:|...|:..|...
Mouse     2 EPTQVAENLVPNQQPPVPDLEDPEDTRDESPE---NSDTVVLSLFP-CTPDAVNPEADASASSLQ 62

  Fly   171 RALLQY---IDN----NDISGLRAILDSRHLTIDDRDENATTVLMVVAGRGLTAFVREFLARGAD 228
            .:.|::   :.|    |::|.|.|.|||  |:|..           :|.:|..:.:::.|.:|| 
Mouse    63 GSFLKHSTTLTNRQRGNEVSALPATLDS--LSIHQ-----------LAAQGELSQLKDHLRKGA- 113

  Fly   229 VQAEDLDNWTALLCASRNGHLDVVQLLLDHGAEVEHRDMGGWTSLMWAAYRGHTELVRLLLDKGA 293
                    ..|..|.|.|.             .:...|..|:|.|:||:..|..|.||.|||.||
Mouse   114 --------CPACTCLSGNN-------------LINKPDERGFTPLIWASAFGEIETVRFLLDWGA 157

  Fly   294 DGNAHGNYHLGALLWAAGRGYKDIVELLVQRGAKVNVGDKYGTTALVWACRRGNVEIVDTLLKAG 358
            |.:........||..|:..||.|||.||:.|...:|:.|..|.|.|::|.|..:|:.|:.||..|
Mouse   158 DPHILAKERESALSLASMGGYTDIVRLLLDRDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG 222

  Fly   359 ANVDTAGMYSWTPLLVAAAGGHTDCVSSILE 389
            |::.|.....:||:.:|.|.|:.. |..::|
Mouse   223 ADLTTEADSGYTPMDLAVALGYRK-VQQVME 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArmsNP_726059.5 ANKYR 172..438 CDD:440430 68/225 (30%)
ANK repeat 205..233 CDD:293786 5/27 (19%)
ANK repeat 235..266 CDD:293786 4/30 (13%)
ANK repeat 268..299 CDD:293786 15/30 (50%)
ANK repeat 301..332 CDD:293786 12/30 (40%)
ANKYR 316..598 CDD:440430 27/74 (36%)
ANK repeat 334..362 CDD:293786 11/27 (41%)
ANK repeat 367..398 CDD:293786 7/23 (30%)
ANK repeat 400..431 CDD:293786
ANK repeat 435..464 CDD:293786
ANK repeat 466..497 CDD:293786
ANK repeat 499..530 CDD:293786
KAP_NTPase 605..1136 CDD:462231
SAM_superfamily 1357..1392 CDD:188886
RfxankNP_035396.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 8/36 (22%)
ANK 1 88..127 14/73 (19%)
ANKYR <93..258 CDD:440430 58/194 (30%)
ANK repeat 93..130 CDD:293786 10/69 (14%)
ANK repeat 132..163 CDD:293786 15/30 (50%)
ANK 2 132..161 15/28 (54%)
ANK repeat 165..196 CDD:293786 12/30 (40%)
ANK 3 165..194 11/28 (39%)
ANK 4 198..227 11/28 (39%)
ANK repeat 198..226 CDD:293786 11/27 (41%)
ANK 5 231..260 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.

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