DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arms and nkpd1

DIOPT Version :10

Sequence 1:NP_726059.5 Gene:Arms / 37433 FlyBaseID:FBgn0261554 Length:1642 Species:Drosophila melanogaster
Sequence 2:XP_004917027.1 Gene:nkpd1 / 100489552 XenbaseID:XB-GENE-6049035 Length:726 Species:Xenopus tropicalis


Alignment Length:674 Identity:164/674 - (24%)
Similarity:273/674 - (40%) Gaps:136/674 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   599 SEGMLGY-ELYSSALADVLSEPTLTTPITVGLYAKWGSGKSFLLNKLRDEMNNFARQWAEPPIRT 662
            |:|.||. ::|.:.|:..|.:  ::||:||||||.:||....||:::...|...:....|....|
 Frog     3 SKGKLGEDDIYCACLSKSLCQ--ISTPVTVGLYAPFGSRVYMLLDRITKCMREVSMYVTEKEEAT 65

  Fly   663 SGLLFIVCLHVALLIGTIVGLSTWSAVVGVSAAVGFLLLAYLLLAAVRYCNYQMDMQWAYSVQHG 727
            ||                   .|....||    .||:.|.:.||.   ||        ....:|.
 Frog    66 SG-------------------QTSRKPVG----WGFMSLLWHLLF---YC--------PVITEHH 96

  Fly   728 LEKRMTRLRLILQVAFCHPPGPQSDSQAKPVRFHFAEANSASPTG-DGAVAHMLAALLDAIESHY 791
            ||:                         |.:.|.|...::....| |...|.::..|.|.:..|:
 Frog    97 LER-------------------------KSIEFIFVNFSAWQYAGSDRLWAGLVTTLCDRVRKHF 136

  Fly   792 GWLATRLYRAFRP---KCLKVDV-GWRWRRMCCIPIVLIFELALVTVVTGISLTVAYFTFADEKE 852
            |.:...:::....   :.|:.:: .|::::..||.:|::..|.|:    |:.|.:.....|....
 Frog   137 GAIPLTVFKVLGTAPRRSLESEITEWKFKKSFCIKLVIVLLLLLI----GLLLLIVPVHSASNGG 197

  Fly   853 KEHILVALYVIAA-VMGTLICTHLHVLAKVFVSLFTSHIRVLKRAVRSSESAPLTMLG------A 910
            .:.:......:|. |.|:.|...|:.|.|   .:..|....::|.|.|.:.:  |.:|      .
 Frog   198 DDKVTTVFGSLATLVSGSGIIMTLYKLVK---GVIISQKHKIERLVNSQKFS--TQMGFMSEVKK 257

  Fly   911 EVAVMTDMVKCLDAFTNQQSRLVGVIDALDSCDTERILTLLNAVQTLLSSPNRPFVLLISVDPHV 975
            ||.::|.||:.::.|..|:.|:|..|.:|:.|..::::.:|:|:.||||....||:.::.|||.:
 Frog   258 EVELITQMVQTMEIFQKQKIRVVLQITSLELCAPDKVVGVLDAMNTLLSDRRAPFISILVVDPSI 322

  Fly   976 IAKAAE-ANSRRLFTEGGIGGHDFLRNLVHLPVYLQNSG-------LRK-VQRAQMTALLFKRSG 1031
            |....| |:|.:...:   .|:.||...|.||..:...|       ||| |||.:          
 Frog   323 IVTCLENASSLKGMAD---NGYMFLNRTVTLPFSVPALGKKTKLQILRKAVQRTE---------- 374

  Fly  1032 GGDYQTDDGPTLGHSVSARRLSNASEIISSQEKLRGPARGGGGKKLRLSESVASSTGSNLH---R 1093
                ...|.|....::...:...|..:     ||         .|..|:|.......:|..   |
 Frog   375 ----DLIDWPCRNDALRVTKTGIAETV-----KL---------LKDELAEEEEPEVQTNYFQTLR 421

  Fly  1094 LGQNPQTVLDLSRIVLTDDYFSDVNPRSMRRLMNVIYITVRLLKAFQI---EFSWYRLSSWINLT 1155
            ..|.....|...|.|| .:|..| :...|:|::|.|.:.|.|:...::   ..|...|::|:.|.
 Frog   422 CIQETFYALYSEREVL-HEYIPD-SICQMKRIVNTIPVMVNLMMLCKVPLDNLSPKSLAAWVVLC 484

  Fly  1156 EQWPLRASMIVLHHDQFMDSNADESVS---LQSVYEKLRPKLAYLREAAP-LLELDRDERKLDAF 1216
            .|||.|.|.|:...:.....|:.||..   |..|::|...:|..|:.... ||:||.|......|
 Frog   485 NQWPCRLSWILQCLEDEEQRNSKESFCSCLLWDVFKKNSKELFSLKTGLKNLLDLDEDPEIFQKF 549

  Fly  1217 LQLHKSDLLVADLRIFLPFTINLD 1240
            |. ........:.|..:.||:|||
 Frog   550 LS-QDFPFTAEESRRLMRFTVNLD 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArmsNP_726059.5 ANKYR 172..438 CDD:440430
ANK repeat 205..233 CDD:293786
ANK repeat 235..266 CDD:293786
ANK repeat 268..299 CDD:293786
ANK repeat 301..332 CDD:293786
ANKYR 316..598 CDD:440430
ANK repeat 334..362 CDD:293786
ANK repeat 367..398 CDD:293786
ANK repeat 400..431 CDD:293786
ANK repeat 435..464 CDD:293786
ANK repeat 466..497 CDD:293786
ANK repeat 499..530 CDD:293786
KAP_NTPase 605..1136 CDD:462231 128/555 (23%)
SAM_superfamily 1357..1392 CDD:188886
nkpd1XP_004917027.1 KAP_NTPase <194..374 CDD:480726 53/187 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.