DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10505 and YCF1

DIOPT Version :9

Sequence 1:NP_611571.2 Gene:CG10505 / 37428 FlyBaseID:FBgn0034612 Length:1312 Species:Drosophila melanogaster
Sequence 2:NP_010419.3 Gene:YCF1 / 851713 SGDID:S000002542 Length:1515 Species:Saccharomyces cerevisiae


Alignment Length:1376 Identity:463/1376 - (33%)
Similarity:727/1376 - (52%) Gaps:161/1376 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QSSPKRESNPFIKANIISKWLFLWMHSVFRKGRREELDASKLYEHLPSFDSESLTRNLQPHWEKE 70
            |:..:|:.||:..|||.|:..|.||..:.:.|..:.|..:.||:...:|.||.|::.|:.:||.|
Yeast   202 QTLTRRKPNPYDSANIFSRITFSWMSGLMKTGYEKYLVEADLYKLPRNFSSEELSQKLEKNWENE 266

  Fly    71 SKKK-NPSLMRLIFKVYGWQFVPVCILYSLLEMAIHSF----QPLLLGGLISYFA-YGQTTVTKE 129
            .|:| ||||...|.:.:|.:     :|.:....|||..    ||.||..||.:.. |........
Yeast   267 LKQKSNPSLSWAICRTFGSK-----MLLAAFFKAIHDVLAFTQPQLLRILIKFVTDYNSERQDDH 326

  Fly   130 SA-----------------YLYAMGIVLCSLVTSLVFHPFMFYVFAVGTRVRLACAGLVYRKCL- 176
            |:                 :|.|..:.|.....:.|.|.:...||..|..::.|...|:|:|.| 
Yeast   327 SSLQGFENNHPQKLPIVRGFLIAFAMFLVGFTQTSVLHQYFLNVFNTGMYIKSALTALIYQKSLV 391

  Fly   177 RASASSGEGLGGQAISVMSIDLSQF-DLTFYFFHDLWKGPVEACIFGYLMTRQVGWTSLIGIAFI 240
            .::.:||....|..:::||:|:.:. ||| .:.:.:|.||.:..|..|.:.:.:|.:..:|:..:
Yeast   392 LSNEASGLSSTGDIVNLMSVDVQKLQDLT-QWLNLIWSGPFQIIICLYSLYKLLGNSMWVGVIIL 455

  Fly   241 VILIPLQAWAAKASASFGTRSAKHRDARVKLMNEIIGAIQVIKMYAWEKSFGRLIAAVRQSEVKA 305
            ||::||.::..:..........|::|.|.::::||:..|:.:|:|||||.:...:..||.:  |.
Yeast   456 VIMMPLNSFLMRIQKKLQKSQMKYKDERTRVISEILNNIKSLKLYAWEKPYREKLEEVRNN--KE 518

  Fly   306 IRGSMSIYAALQCTNMISKISLFL----SLVAYVYVGD-LVTAKKVFILSSYYGLLNDSLLHYWP 365
            ::....:...:..|:....|..||    :...:||..| .:|...||...:.:.||:..|: ..|
Yeast   519 LKNLTKLGCYMAVTSFQFNIVPFLVSCCTFAVFVYTEDRALTTDLVFPALTLFNLLSFPLM-IIP 582

  Fly   366 MAITTWAQTLVSARRVVEFLLQVEKPTEESCCRDNPGLELDAEKPKPAQSGRLHCVQSETKCLSF 430
            |.:.::.:..||..|:..|.             .|..|:.|:             ||...|..:.
Yeast   583 MVLNSFIEASVSIGRLFTFF-------------TNEELQPDS-------------VQRLPKVKNI 621

  Fly   431 RKVSAS-WDKPSIKQPRKPH----IEGISFHINAGQFVGIVGNVGSGKSTLLHAILGEIELMQGR 490
            ..|:.: .|..:....|||.    ::.|:|....|....|||.|||||:.||..:||::..::|.
Yeast   622 GDVAINIGDDATFLWQRKPEYKVALKNINFQAKKGNLTCIVGKVGSGKTALLSCMLGDLFRVKGF 686

  Fly   491 VEVHGRISYAAQQPWVFQGSIRENILFVEQYEEKRYRAVVHACQLDRDLELLPRGDATVVGERGI 555
            ..|||.::|.:|.||:..|:::|||||..:|:.:.|...:.||.|..||.:|..||.|:|||:||
Yeast   687 ATVHGSVAYVSQVPWIMNGTVKENILFGHRYDAEFYEKTIKACALTIDLAILMDGDKTLVGEKGI 751

  Fly   556 SLSGGQKARIALARAVYRQADIYLFDDPLAAVDAQVGKLLMDKCF--HRLLDGKMRILVTHHVQL 618
            |||||||||::||||||.:||.||.||||||||..|.:.|::...  :.||..|.::|.|:.|..
Yeast   752 SLSGGQKARLSLARAVYARADTYLLDDPLAAVDEHVARHLIEHVLGPNGLLHTKTKVLATNKVSA 816

  Fly   619 LKSVDQLLLLEGGKLTQQGSYEELKDVITHHAALDL----------------EAIEADKQQVKRV 667
            |...|.:.||:.|::||||:|:|    ||..|...|                |..::.:..|:..
Yeast   817 LSIADSIALLDNGEITQQGTYDE----ITKDADSPLWKLLNNYGKKNNGKSNEFGDSSESSVRES 877

  Fly   668 LSQVDRTSKQLSKGEEKD-------------PATI------QDEN-GNAEQQLQGAVSYDTYKAY 712
            ...|:...:||.|..:.|             .||:      .||| ...|.:.||.|.::.|..|
Yeast   878 SIPVEGELEQLQKLNDLDFGNSDAISLRRASDATLGSIDFGDDENIAKREHREQGKVKWNIYLEY 942

  Fly   713 FRALG----APFLVCLVLSMFVLARGCQAVMDIFISRWATWEEDRGYDSVDDYEATRTKMVIWYT 773
            .:|..    ..|::.:|:|||:...|     ::::..|:  |.:..|.|  :..|.| .:.|::.
Yeast   943 AKACNPKSVCVFILFIVISMFLSVMG-----NVWLKHWS--EVNSRYGS--NPNAAR-YLAIYFA 997

  Fly   774 VLLLLTLALFLLRTFGFFFMC-LRISLTLHDQLYHGIIRAWMYFFNANPSGRVLNRFSSDIQNVD 837
            :.:...||. |::|...:..| :..|..||:.:.:.::||.|.||...|.||:|||||:||..||
Yeast   998 LGIGSALAT-LIQTIVLWVFCTIHASKYLHNLMTNSVLRAPMTFFETTPIGRILNRFSNDIYKVD 1061

  Fly   838 VNLPQAMMDSLQFLVDVVAV--LVIVAIANYW----LLIPAAIMVILLYFCRALYIGASRSLKRI 896
            ..|.:...   ||.|:.|.|  .:.|..|..|    ::||.::..|   :.:..|:..||.|:|:
Yeast  1062 ALLGRTFS---QFFVNAVKVTFTITVICATTWQFIFIIIPLSVFYI---YYQQYYLRTSRELRRL 1120

  Fly   897 ESLTRSPIYSHTNQTFHGHSTIRSMDAMPQLEQTFHGHQNTNSSALFLYVSANRAFSFWTDLICV 961
            :|:||||||||..:|..|.:|:|......:.........:.|.||.:..::|||..::..:||..
Yeast  1121 DSITRSPIYSHFQETLGGLATVRGYSQQKRFSHINQCRIDNNMSAFYPSINANRWLAYRLELIGS 1185

  Fly   962 IYIL-AVTFSFLVINQ-SFYSGDVGLAITQSMTLVIMCQWGMRQTAEMENNMTSVERVLEYAQTP 1024
            |.|| |.|.|...:.| :..:|.|||:::.::.:.....|.:|.|.|:|.|:.||||:.|||...
Yeast  1186 IIILGAATLSVFRLKQGTLTAGMVGLSLSYALQITQTLNWIVRMTVEVETNIVSVERIKEYADLK 1250

  Fly  1025 SEPPL-----ESPKSVNLAAEWPQAGHLRFQDLRMRYSPGDEDILRGLNFESQPMEKIGIVGRTG 1084
            ||.||     ..||      |||..|.::|.:...||.|..:.:|:.:|...:|.||:|||||||
Yeast  1251 SEAPLIVEGHRPPK------EWPSQGDIKFNNYSTRYRPELDLVLKHINIHIKPNEKVGIVGRTG 1309

  Fly  1085 AGKSSIIQALFR-LALNEGTIEIDGLDIGKLGLHDLRSRISIIPQDPVLFSGTLRFNLDPFDEKS 1148
            |||||:..|||| :..:||.|.||.:.|.::||:|||.::||||||..:|.||:|.|:||.::.:
Yeast  1310 AGKSSLTLALFRMIEASEGNIVIDNIAINEIGLYDLRHKLSIIPQDSQVFEGTVRENIDPINQYT 1374

  Fly  1149 DESLWSALDDVKLKKHVASLEG-GLSCRMQDGGSNFSMGQRQLVCLARAILRQNRVLVMDEATAN 1212
            ||::|.||:...||:||.|:.. ||..::.:||.|.|:|||||:|||||:|..:::||:|||||.
Yeast  1375 DEAIWRALELSHLKEHVLSMSNDGLDAQLTEGGGNLSVGQRQLLCLARAMLVPSKILVLDEATAA 1439

  Fly  1213 VDTETDILIQETIQTKFAECTVLTIAHRLHTVMDNDSVLVMDAGQIVEFGAPHKLLQRKDGALLK 1277
            ||.|||.::||||:|.|.:.|:|||||||:|:||:|.::|:|.|::.||.:|.:||.........
Yeast  1440 VDVETDKVVQETIRTAFKDRTILTIAHRLNTIMDSDRIIVLDNGKVAEFDSPGQLLSDNKSLFYS 1504

  Fly  1278 ------LVNQN 1282
                  |||:|
Yeast  1505 LCMEAGLVNEN 1515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10505NP_611571.2 CFTR_protein 12..1268 CDD:273530 455/1348 (34%)
ABC_membrane 95..360 CDD:294371 72/293 (25%)
ABCC_MRP_domain1 428..632 CDD:213217 89/210 (42%)
ABC_membrane 728..994 CDD:294371 84/274 (31%)
ABCC_MRP_domain2 1045..1264 CDD:213211 112/220 (51%)
YCF1NP_010419.3 MRP_assoc_pro 27..1511 CDD:188098 459/1370 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 173 1.000 Domainoid score I751
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S916
OMA 1 1.010 - - QHG51855
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.670

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