DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10505 and ABCC4

DIOPT Version :9

Sequence 1:NP_611571.2 Gene:CG10505 / 37428 FlyBaseID:FBgn0034612 Length:1312 Species:Drosophila melanogaster
Sequence 2:NP_182301.1 Gene:ABCC4 / 819392 AraportID:AT2G47800 Length:1516 Species:Arabidopsis thaliana


Alignment Length:1330 Identity:403/1330 - (30%)
Similarity:689/1330 - (51%) Gaps:123/1330 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SKQSSPKRESNP-----------FIKANIISKWLFLWMHSVFRKGRREELDASKLYEHLPSFDSE 57
            ::.:||.:.|:.           :..|::.||..:|||:.:..||.:..|...::....|...:|
plant   229 AETNSPTKPSDAVSVEKSDNVSLYASASVFSKTFWLWMNPLLSKGYKSPLTLEQVPTLSPEHKAE 293

  Fly    58 SLTRNLQPHWEKESKKKNPSLMRLIFKVYGWQFVPVCILYSLLEMAIHSFQPLLLGGLISYFAYG 122
            .|....:..|.|.|:..:..:...:.:.: |:.:....:.:::.:.:....|:|:...:. |..|
plant   294 RLALLFESSWPKPSENSSHPIRTTLLRCF-WKEILFTAILAIVRLGVMYVGPVLIQSFVD-FTSG 356

  Fly   123 QTTVTKESAYLYAMGIVLCSLVTSLVFHPFMFYVFAVGTRVRLACAGLVYRKCLRASASSGEGLG 187
            :.:...:..||..: :::...|..|..|.|.|....:|..:|......:|:|.|:.:.|:.:..|
plant   357 KRSSPWQGYYLVLI-LLVAKFVEVLTTHQFNFDSQKLGMLIRSTLITALYKKGLKLTGSARQNHG 420

  Fly   188 -GQAISVMSIDLSQFDLTFYFFHDLWKGPVEACIFGYLMTRQVG---WTSLIGI--AFIVILIPL 246
             ||.::.|::|..|........|.:|..|::..:...|:...:|   .|::||:  .|:.||:..
plant   421 VGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQVTVALVLLYGSLGASVITAVIGLTGVFVFILLGT 485

  Fly   247 QAWAAKASASFGTRSAKHRDARVKLMNEIIGAIQVIKMYAWEKSFGRLIAAVRQSE-------VK 304
            |.......:..|     :||:|:|..||::..::|||..|||..|.:.|...|..|       :.
plant   486 QRNNGYQFSLMG-----NRDSRMKATNEMLNYMRVIKFQAWENHFNKRILKFRDMEFGWLSKFLY 545

  Fly   305 AIRGSMSIYAALQCTNMISKISLFLSLVAYVYVGDLVTAKKVFILSSYYGLLNDSLLHYWPMAIT 369
            :|.|::.:   |..|.::.....|.:.:|   :|..:.|..||..::.:.:|.:. :..:|.::.
plant   546 SIAGNIIV---LWSTPVLISALTFATALA---LGVKLDAGTVFTTTTIFKILQEP-IRTFPQSMI 603

  Fly   370 TWAQTLVSARRVVEFLLQVEKPTEESC-----CRDNPGLELDAEKPKPAQSGRLHCVQSETKCLS 429
            :.:|.::|..|:..:::..|. :|::.     |..|..:|:                        
plant   604 SLSQAMISLGRLDSYMMSKEL-SEDAVERALGCDGNTAVEV------------------------ 643

  Fly   430 FRKVSASWDKPSIKQPRKPHIEGISFHINAGQFVGIVGNVGSGKSTLLHAILGEIELMQGRVEVH 494
             |..|.|||    .:..:|.:..|:|.:..|:...|||.||||||:||.::|||:..:.|:|.|.
plant   644 -RDGSFSWD----DEDNEPALSDINFKVKKGELTAIVGTVGSGKSSLLASVLGEMHRISGQVRVC 703

  Fly   495 GRISYAAQQPWVFQGSIRENILFVEQYEEKRYRAVVHACQLDRDLELLPRGDATVVGERGISLSG 559
            |...|.||..|:..|::::||||......::|..|::.|.|::||:::..||.|.:|||||:|||
plant   704 GSTGYVAQTSWIENGTVQDNILFGLPMVREKYNKVLNVCSLEKDLQMMEFGDKTEIGERGINLSG 768

  Fly   560 GQKARIALARAVYRQADIYLFDDPLAAVDAQVGKLLMDKCFHRLLDGKMRILVTHHVQLLKSVDQ 624
            |||.||.||||||::.|:||.||..:||||..|..:..||....|.||..:||||.|..|.:||.
plant   769 GQKQRIQLARAVYQECDVYLLDDVFSAVDAHTGSDIFKKCVRGALKGKTVLLVTHQVDFLHNVDC 833

  Fly   625 LLLLEGGKLTQQGSYEELKD--------VITHHAALDLEAIEADKQQV---KRVLSQVDRTSKQL 678
            :|::..||:.:.|.|:||..        |..|..:::|....||...|   .|..:....:|.:.
plant   834 ILVMRDGKIVESGKYDELVSSGLDFGELVAAHETSMELVEAGADSAAVATSPRTPTSPHASSPRT 898

  Fly   679 SKGEEKDPATIQDENGNA----------------EQQLQGAVSYDTYKAYFRALGAPFLVCLVLS 727
            |. |....:.:.||:..:                |::..|.||...||.|.......:.:.|||.
plant   899 SM-ESPHLSDLNDEHIKSFLGSHIVEDGSKLIKEEERETGQVSLGVYKQYCTEAYGWWGIVLVLF 962

  Fly   728 MFVLARGCQAVMDIFISRWATWEEDRGYDSVDDYEATRTKMVIWYTVLLLLTLALFLLRTFGFFF 792
            ..:..:|.....|.:::...:.:....:|:        :..::.|.::.|:::.|..:|::....
plant   963 FSLTWQGSLMASDYWLAYETSAKNAISFDA--------SVFILGYVIIALVSIVLVSIRSYYVTH 1019

  Fly   793 MCLRISLTLHDQLYHGIIRAWMYFFNANPSGRVLNRFSSDIQNVDVNLPQAMMDSLQFLVDVVAV 857
            :.|:.:.....|:.:.|:.|.|.||:..||||:|:|.|:|..|||:.:|    ..|..:|.:...
plant  1020 LGLKTAQIFFRQILNSILHAPMSFFDTTPSGRILSRASTDQTNVDILIP----FMLGLVVSMYTT 1080

  Fly   858 LVIVAIANYWLLIPAAIMVI----LLYFCRALYIGASRSLKRIESLTRSPIYSHTNQTFHGHSTI 918
            |:.:.|.......|.|..||    |..:.|..|:.:||.|.|::|:|::||..|.:::..|..||
plant  1081 LLSIFIVTCQYAWPTAFFVIPLGWLNIWYRNYYLASSRELTRMDSITKAPIIHHFSESIAGVMTI 1145

  Fly   919 RSMDAMPQLEQTFHGHQNTNSSALFLYVSANRAFSFWTDLICVIYILAVTFSFLVINQS--FYSG 981
            ||........|......|.|....|....:|....|..:|: ..::|.::..|:|:..|  ....
plant  1146 RSFRKQELFRQENVKRVNDNLRMDFHNNGSNEWLGFRLELV-GSWVLCISALFMVLLPSNVIRPE 1209

  Fly   982 DVGLAITQSMTLVIMCQWGMRQTAEMENNMTSVERVLEYAQTPSEPPLESPKSVNLAAEWPQAGH 1046
            :|||:::..::|..:..:.:..:..:||.|.||||:.::...|||...|..:::. .:.||..|:
plant  1210 NVGLSLSYGLSLNSVLFFAIYMSCFVENKMVSVERIKQFTDIPSESEWERKETLP-PSNWPFHGN 1273

  Fly  1047 LRFQDLRMRYSPGDEDILRGLNFESQPMEKIGIVGRTGAGKSSIIQALFRLA-LNEGTIEIDGLD 1110
            :..:||::||.|....:|:|:..:.:..||:|:|||||:|||::||.||||. .:.|.|.|||:|
plant  1274 VHLEDLKVRYRPNTPLVLKGITLDIKGGEKVGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGID 1338

  Fly  1111 IGKLGLHDLRSRISIIPQDPVLFSGTLRFNLDPFDEKSDESLWSALDDVKLKKHVASLEGGLSCR 1175
            |..|||||||||..||||:||||.||:|.|:||.::.|||.:|.:|:..:||..||:....|...
plant  1339 ISTLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDVVATKPEKLDSL 1403

  Fly  1176 MQDGGSNFSMGQRQLVCLARAILRQNRVLVMDEATANVDTETDILIQETIQTKFAECTVLTIAHR 1240
            :.|.|.|:|:|||||:||.|.:|:::|:|.:|||||:||::||.:||:.|:..||.||:::||||
plant  1404 VVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFASCTIISIAHR 1468

  Fly  1241 LHTVMDNDSVLVMDAGQIVEFGAPHKLLQR 1270
            :.||||.|.|||:|||:..||.:|.:||:|
plant  1469 IPTVMDGDRVLVIDAGKAKEFDSPARLLER 1498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10505NP_611571.2 CFTR_protein 12..1268 CDD:273530 398/1318 (30%)
ABC_membrane 95..360 CDD:294371 63/277 (23%)
ABCC_MRP_domain1 428..632 CDD:213217 88/203 (43%)
ABC_membrane 728..994 CDD:294371 65/271 (24%)
ABCC_MRP_domain2 1045..1264 CDD:213211 113/219 (52%)
ABCC4NP_182301.1 CFTR_protein 255..1502 CDD:273530 400/1304 (31%)
ABC_membrane 331..595 CDD:294371 63/277 (23%)
ABCC_MRP_domain1 641..841 CDD:213217 89/228 (39%)
ABC_membrane 976..1229 CDD:294371 64/265 (24%)
ABCC_MRP_domain2 1272..1492 CDD:213211 113/219 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.720

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