DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10505 and Abcb8

DIOPT Version :9

Sequence 1:NP_611571.2 Gene:CG10505 / 37428 FlyBaseID:FBgn0034612 Length:1312 Species:Drosophila melanogaster
Sequence 2:NP_083296.2 Gene:Abcb8 / 74610 MGIID:1351667 Length:717 Species:Mus musculus


Alignment Length:609 Identity:155/609 - (25%)
Similarity:277/609 - (45%) Gaps:86/609 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   715 ALGAPFL---VCLVLSMFV--LARGCQAVMDIFISRWATWEEDRGYDSVDDYEATRTKMVIWYTV 774
            ||||..:   :.|:|...|  :|:..:..|..|:|      |.|             |:    :|
Mouse   137 ALGAALVNVQIPLLLGQLVEIVAKYTRDHMGSFVS------ESR-------------KL----SV 178

  Fly   775 LLLLTLALFLLRTFGFFFMCL----RISLTLHDQLYHGIIRAWMYFFNANPSGRVLNRFSSDIQN 835
            .|||...:..|.|||:..:..    |:::.:...|:..::|..:.||:|..:|::::|.::|:|.
Mouse   179 QLLLLYGVQGLLTFGYLVLLSHIGERMAMDMRKALFSSLLRQDIAFFDAKKTGQLVSRLTTDVQE 243

  Fly   836 VDVNLPQAMMDSLQFLVDVVAVLVIVAIANYWLLIPAAIMVILLYFCRALYIGASRSLKR--IES 898
            ...:....:...|:....|:..||.:::.:..|.:..|::...|.....|.....|.|.|  .|.
Mouse   244 FKSSFKLVISQGLRSCTQVIGSLVSLSMLSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQ 308

  Fly   899 LTRSPIYSHTNQTFHGHSTIRSMDAMPQLEQTFHGHQNT---------NSSALFLYVSANRAFSF 954
            :.|:.  ...::......|:|:.....:.|:.:.....:         ...|||..:| |.||: 
Mouse   309 IARAT--GVADEALGNVRTVRAFAMEKREEERYQAELESCCCKAEELGRGIALFQGLS-NIAFN- 369

  Fly   955 WTDLICVIYILAVTFSFLVINQSFYSGDVGLAITQSMTLVIMCQWGMRQTAEME-------NNMT 1012
                 |::.........||..|....||:       |:.::..|...|..|.:.       ..::
Mouse   370 -----CMVLGTLFIGGSLVAGQQLKGGDL-------MSFLVASQTVQRSMASLSVLFGQVVRGLS 422

  Fly  1013 SVERVLEYAQTPSEPPLESPKSVNLAAEWPQ---AGHLRFQDLRMRY--SPGDEDILRGLNFESQ 1072
            :..||.||.......||.....:      |.   .|.:.||::...|  .|| .::|:....:..
Mouse   423 AGARVFEYMALSPVIPLTGGYCI------PNKDIRGSITFQNVTFSYPCRPG-FNVLKDFTLKLP 480

  Fly  1073 PMEKIGIVGRTGAGKSSIIQALFRLALNE-GTIEIDGLDIGKLGLHDLRSR-ISIIPQDPVLFSG 1135
            ..:.:.:||::|.||:::...|.|....| |::.:||.|:..|....||.: |..|.|:||||:.
Mouse   481 SGKIVALVGQSGGGKTTVASLLERFYDPEAGSVTLDGHDLRTLNPSWLRGQVIGFISQEPVLFAT 545

  Fly  1136 TLRFNLDPFD--EKSDESLWSALDDVKLKKHVASLEGGLSCRMQDGGSNFSMGQRQLVCLARAIL 1198
            |:..|: .|.  :.|||.:::|..:....:.::|...|.|..:.:.|:..|.||:|.:.:|||::
Mouse   546 TIMENI-RFGKLDASDEEVYTAAREANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALI 609

  Fly  1199 RQNRVLVMDEATANVDTETDILIQETIQTKFAECTVLTIAHRLHTVMDNDSVLVMDAGQIVEFGA 1263
            :|..||::||||:.:|.|::.::||.:....|..|||.|||||.||....|::||..||:.|.|.
Mouse   610 KQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCEAGT 674

  Fly  1264 PHKLLQRKDGALLKLVNQN--DAT 1285
             |:.|.:|.|...:|:.:.  ||:
Mouse   675 -HEELLKKGGLYSELIRRQTLDAS 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10505NP_611571.2 CFTR_protein 12..1268 CDD:273530 149/588 (25%)
ABC_membrane 95..360 CDD:294371
ABCC_MRP_domain1 428..632 CDD:213217
ABC_membrane 728..994 CDD:294371 56/282 (20%)
ABCC_MRP_domain2 1045..1264 CDD:213211 76/224 (34%)
Abcb8NP_083296.2 MdlB 116..695 CDD:224055 153/605 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 695..717 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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