DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10505 and rdog

DIOPT Version :9

Sequence 1:NP_611571.2 Gene:CG10505 / 37428 FlyBaseID:FBgn0034612 Length:1312 Species:Drosophila melanogaster
Sequence 2:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster


Alignment Length:1382 Identity:704/1382 - (50%)
Similarity:946/1382 - (68%) Gaps:109/1382 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RESNPFIKANIISKWLFLWMHSVFRKGRREELDASKLYEHLPSFDSESLTRNLQPHWEKESKKKN 75
            |..|||.|||..|:|.|.||..:|::|.:..|...:||:|..:.|||.:|......||.|.|:.|
  Fly    10 RPKNPFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFAELWEDELKRSN 74

  Fly    76 PSLMRLIFKVYGWQFVPVCILYSLLEMAIHSFQPLLLGGLISYFAYGQTTVTKESAYLYAMGIVL 140
            ||::|:|.:.||..|||:.:.:|:.|....|..||.||||:.|||..||.:::.:|||||||||:
  Fly    75 PSVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLGGLVGYFATNQTDISENTAYLYAMGIVI 139

  Fly   141 CSLVTSLVFHPFMFYVFAVGTRVRLACAGLVYRKCLRAS-ASSGEGLGGQAISVMSIDLSQFDLT 204
            |.||..:.||||:||:|.|||::|||.:||:|||.|:.| :||.:||.|:||:::|.||.:||:.
  Fly   140 CMLVPVITFHPFIFYIFQVGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRAINILSNDLGRFDVA 204

  Fly   205 FYFFHDLWKGPVEACIFGYLMTRQVGWTSLIGIAFIVILIPLQAWAAKASASFGTRSAKHRDARV 269
            ..|.||.||||:|:.:.|:||.|::|.:::||::|::..|||||||||.:|.:...:|:..|.||
  Fly   205 LCFLHDTWKGPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTAERTDMRV 269

  Fly   270 KLMNEIIGAIQVIKMYAWEKSFGRLIAAVRQSEVKAIRGSMSIYAALQCTNMISKISLFLSLVAY 334
            |||||||..|||||||||||||.|:||.||..|||||||:..|:|||.||:|||.:|:||:|.:|
  Fly   270 KLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYIHAALGCTSMISPLSVFLALCSY 334

  Fly   335 VYVGDLVTAKKVFILSSYYGLLNDSLLHYWPMAITTWAQTLVSARRVVEFLLQVEKPTEESCCRD 399
            ||:||.:||:||:.:|||:.:||||::.:|||:||..|:.||||:|..:|||..:|       .:
  Fly   335 VYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLLDGDK-------AE 392

  Fly   400 NPGLELDA--------------EKPKPAQ-------SGRLH-------CVQSETKCLSFRKVSAS 436
            .| :.|:|              :|.|..:       :|::|       ..::..||:..:.||||
  Fly   393 VP-INLEANQQTGKNKRKISKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKNVSAS 456

  Fly   437 WDKPSIKQPRKPH----IEGISFHINAGQFVGIVGNVGSGKSTLLHAILGEIELMQGRVEVHGRI 497
            ||...      .|    ||..|..|.......:||.||:|||:.|:.:|||:.:.:|...|||:|
  Fly   457 WDTSD------GHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVHGKI 515

  Fly   498 SYAAQQPWVFQGSIRENILFVEQYEEKRYRAVVHACQLDRDLELLPRGDATVVGERGISLSGGQK 562
            |||:|:.|||:|:||:||:|||.|.|:||:.||..|.|:||:|||||||.|||||||:|||||||
  Fly   516 SYASQESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQK 580

  Fly   563 ARIALARAVYRQADIYLFDDPLAAVDAQVGKLLMDKCFHRLLDGKMRILVTHHVQLLKSVDQLLL 627
            ||::|||||||:|||||.||||:|||..|||.:.|:|....|..|:||||||.||.|..|:.|||
  Fly   581 ARVSLARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCIRDFLSNKIRILVTHQVQYLFDVEHLLL 645

  Fly   628 LEGGKLTQQGSYEELK----------------DVITHHAALDLEAIEADKQQVKRVLSQVDRTSK 676
            :..||:..||||:||:                .:.||..:..|...:::|        .::....
  Fly   646 MGSGKIMAQGSYQELQRSRQFQFLEQTQHDESGIDTHSVSSYLSRSDSEK--------SMEHQHN 702

  Fly   677 QLSKGEEKDPATIQDENGNAEQQLQGAVSYDTYKAYFRALGAPFLVCLVLSMFVLARGCQAVMDI 741
            ||.:.:|      ..|:.|.|||..|::....|.:|.:||.:.||:.:|:|:||.||.....:|.
  Fly   703 QLLRPDE------HVEDVNQEQQTVGSIKMHVYASYIKALDSTFLLGIVISLFVCARIMLTGVDY 761

  Fly   742 FISRWATWEEDRG---------------------YDSVDDYEA----------TRTKMVIWYTVL 775
            |:|||..|||...                     .::.|.|.|          .|.::|::|..:
  Fly   762 FLSRWVIWEEQIAVNRTTTLLNETDTTIANDTLPINATDPYIAPLLASDIQAGIRQELVLFYATI 826

  Fly   776 LLLTLALFLLRTFGFFFMCLRISLTLHDQLYHGIIRAWMYFFNANPSGRVLNRFSSDIQNVDVNL 840
            |..||.::|:||||||.|||||||.|||:|:.||.||.|||||.|.|||:|||||.||:.||.:|
  Fly   827 LGATLIVYLIRTFGFFKMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTDL 891

  Fly   841 PQAMMDSLQFLVDVVAVLVIVAIANYWLLIPAAIMVILLYFCRALYIGASRSLKRIESLTRSPIY 905
            |..::|.|.|::||..|::|||||||||||||||:.::|...|.||:..|||:||:||::|||::
  Fly   892 PHTLLDCLAFIIDVSGVVIIVAIANYWLLIPAAIIGVILGMIRYLYVNTSRSVKRLESISRSPVF 956

  Fly   906 SHTNQTFHGHSTIRSMDAMPQLEQTFHGHQNTNSSALFLYVSANRAFSFWTDLICVIYILAVTFS 970
            |.|||||.|.:|||::.|...|||.||.:||||:||.||::|..|||:.|:|::|::|:.|||||
  Fly   957 SLTNQTFQGLTTIRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDVLCIVYMTAVTFS 1021

  Fly   971 FLVINQSFYSGDVGLAITQSMTLVIMCQWGMRQTAEMENNMTSVERVLEYAQTPSEPPLESPKSV 1035
            ||::...|.||||||||..|.|:..|||||||||||:||.||||||||||.:.|||..||:|:..
  Fly  1022 FLLLKDEFDSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEYTEQPSEALLETPEKF 1086

  Fly  1036 NLAAEWPQAGHLRFQDLRMRYSPGDEDILRGLNFESQPMEKIGIVGRTGAGKSSIIQALFRLALN 1100
            ...:|||..|.:.|.:.::||||.:..:|:.|||..:|.||||||||||||||||||::||||.|
  Fly  1087 KPKSEWPSKGRIEFINFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFRLACN 1151

  Fly  1101 EGTIEIDGLDIGKLGLHDLRSRISIIPQDPVLFSGTLRFNLDPFDEKSDESLWSALDDVKLKKHV 1165
            ||.|.||.:||..:|||||||::|||||||||||||||:||||.||:|||.:|.||.||:|:.:|
  Fly  1152 EGMIRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKALGDVELRSYV 1216

  Fly  1166 ASLEGGLSCRMQDGGSNFSMGQRQLVCLARAILRQNRVLVMDEATANVDTETDILIQETIQTKFA 1230
            ::|.|||:|||.|||||||:||||||||||||||.|::|:|||||||||.|||.|||:||::|||
  Fly  1217 STLIGGLNCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANVDPETDKLIQQTIRSKFA 1281

  Fly  1231 ECTVLTIAHRLHTVMDNDSVLVMDAGQIVEFGAPHKLLQRKDGALLKLVNQNDATTVKFLKRIAS 1295
            .|||||||||||||||:|.|||||||::.|.|.|::||||..|.|.:||:...|.|...|::.|.
  Fly  1282 HCTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQRTGGYLRQLVDNTGAATSFALQQAAE 1346

  Fly  1296 ESYMRRNRRDSLTISEE 1312
            :||.::...|. |.:|:
  Fly  1347 QSYSKQILGDD-TAAED 1362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10505NP_611571.2 CFTR_protein 12..1268 CDD:273530 686/1335 (51%)
ABC_membrane 95..360 CDD:294371 148/265 (56%)
ABCC_MRP_domain1 428..632 CDD:213217 114/207 (55%)
ABC_membrane 728..994 CDD:294371 148/296 (50%)
ABCC_MRP_domain2 1045..1264 CDD:213211 154/218 (71%)
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 697/1358 (51%)
ABC_membrane 94..360 CDD:294371 148/265 (56%)
ABCC_MRP_domain1 448..650 CDD:213217 114/207 (55%)
ABC_membrane 821..1046 CDD:294371 131/224 (58%)
ABCC_MRP_domain2 1096..1315 CDD:213211 154/218 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440867
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I246
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm14754
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - P PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

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