DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10505 and Tap1

DIOPT Version :9

Sequence 1:NP_611571.2 Gene:CG10505 / 37428 FlyBaseID:FBgn0034612 Length:1312 Species:Drosophila melanogaster
Sequence 2:NP_114444.2 Gene:Tap1 / 24811 RGDID:3817 Length:725 Species:Rattus norvegicus


Alignment Length:611 Identity:130/611 - (21%)
Similarity:262/611 - (42%) Gaps:103/611 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   717 GAPFLVC--------------LVLSMFVLARGCQAVMDIFISRWATWEEDRGYDSVDDYEATRTK 767
            ||..::|              |||.:.:|:...:..:..|..|...|       .:.|..|....
  Rat   145 GAGDMLCRMLGFLDSKKGRLHLVLVLLILSCLGEMAIPFFTGRITDW-------ILQDKTAPSFA 202

  Fly   768 MVIWYTVLLLLTLALFLLRTFGFFFMCLRISLTLHDQLYHGIIRAWMY----FFNANPSGRVLNR 828
            ..:|  ::.:||:|...|...|.....:.:. .:|.:::..:.||.::    ||..||:|.:.:|
  Rat   203 RNMW--LMCILTVASTALEFAGDGIYNITMG-HMHSRVHGEVFRAVLHQETGFFLKNPTGSITSR 264

  Fly   829 FSSDIQNVDVNLPQAMMDSLQFLVDVVAVLVIVAIANYWLLIPAAIMVILLYFC--------RAL 885
            .:.|..||..::...:...|.:|...:.:|..:...:::|.:...:.:.||:..        ::|
  Rat   265 VTEDTSNVCESISDKLNLFLWYLGRGLCLLAFMIWGSFYLTVVTLLSLPLLFLLPRRLGKVYQSL 329

  Fly   886 YIGASRSLKR-----IESLTRSP-IYSHTNQTFHGHSTIRSMDAMPQLEQTFHGHQNTNSSALFL 944
            .:....||.:     :|:|:..| :.|..|:........:.::.|..|          |......
  Rat   330 AVKVQESLAKSTQVALEALSAMPTVRSFANEEGEAQKFRQKLEEMKPL----------NKKEALA 384

  Fly   945 YVSANRAFSFWTDLICVIYILAVTFSFLVINQSFYSGDV---GLAITQSMTLVIMCQWGMRQTAE 1006
            ||:     ..||        ::|:...|.:...:..|.:   |...:.::...::.|....:..|
  Rat   385 YVT-----EVWT--------MSVSGMLLKVGILYLGGQLVVRGAVSSGNLVSFVLYQLQFTRAVE 436

  Fly  1007 --------MENNMTSVERVLEYA-QTPSEPPLESPKSVNLAAEWPQAGHLRFQDLRMRY-SPGDE 1061
                    |:.::.:.|::.||. :||..|...|...:|:      .|.::|||:...| :..:.
  Rat   437 VLLSIYPSMQKSVGASEKIFEYLDRTPCSPLSGSLAPLNM------KGLVKFQDVSFAYPNHPNV 495

  Fly  1062 DILRGLNFESQPMEKIGIVGRTGAGKSSI---IQALFRLALNEGTIEIDGLDIGKLGLHDLRSRI 1123
            .:|:||.|...|.:...:||..|:|||::   :|.|::  ...|.:.:||..:.:...|.|.:::
  Rat   496 QVLQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQ--PTGGKVLLDGELLVQYDHHYLHTQV 558

  Fly  1124 SIIPQDPVLFSGTLRFNL-------DPFDEKSDESLWSALDDVKLKKHVASLEGGLSCRMQDGGS 1181
            :.:.|:|:||..:.|.|:       ...:|.:..::.|...|     .::....|....:.:.|:
  Rat   559 AAVGQEPLLFGRSFRENIAYGLTRTPTMEEITAVAMESGAHD-----FISGFPQGYDTEVGETGN 618

  Fly  1182 NFSMGQRQLVCLARAILRQNRVLVMDEATANVDTETDILIQETI--QTKFAECTVLTIAHRLHTV 1244
            ..|.||||.|.||||::|:.|:|::|:||:.:|....:.:|..:  ..::|..|||.|..:|...
  Rat   619 QLSGGQRQAVALARALIRKPRLLILDDATSALDAGNQLRVQRLLYESPEWASRTVLLITQQLSLA 683

  Fly  1245 MDNDSVLVMDAGQIVEFGAPHKLLQR 1270
            .....:|.:..|.:.|.|...:|::|
  Rat   684 ERAHHILFLKEGSVCEQGTHLQLMER 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10505NP_611571.2 CFTR_protein 12..1268 CDD:273530 128/607 (21%)
ABC_membrane 95..360 CDD:294371
ABCC_MRP_domain1 428..632 CDD:213217
ABC_membrane 728..994 CDD:294371 49/286 (17%)
ABCC_MRP_domain2 1045..1264 CDD:213211 62/231 (27%)
Tap1NP_114444.2 3a01208 2..717 CDD:273363 130/611 (21%)
ABC_membrane 177..435 CDD:279056 49/290 (17%)
Part of the peptide-binding site. /evidence=ECO:0000250|UniProtKB:Q03518 352..397 11/67 (16%)
Part of the peptide-binding site. /evidence=ECO:0000250|UniProtKB:Q03518 430..464 6/33 (18%)
P-loop_NTPase 469..697 CDD:304359 62/240 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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