DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10505 and haf-3

DIOPT Version :9

Sequence 1:NP_611571.2 Gene:CG10505 / 37428 FlyBaseID:FBgn0034612 Length:1312 Species:Drosophila melanogaster
Sequence 2:NP_506927.2 Gene:haf-3 / 180056 WormBaseID:WBGene00001813 Length:666 Species:Caenorhabditis elegans


Alignment Length:690 Identity:151/690 - (21%)
Similarity:280/690 - (40%) Gaps:150/690 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   661 KQQVKRV-LSQVDRTSKQLSKGEEKDPATIQDENGNAEQQLQGAVSYDTYKAYFRALGAPFLVCL 724
            ||..:.| :.:..|.|.:|.....||...|....|..:.::...:|:         ||      :
 Worm    47 KQAFRNVSVVETKRESYKLKNASWKDLKAILSLAGPYKWRIMLGISF---------LG------I 96

  Fly   725 VLSMFVLARGCQAVMDIFISRWATWEEDRGYDSVDDYEATRTKMVIWYTVLLLLTLALFLLRTF- 788
            ..|:|:..   ..|:...|..|...::|: .|..|.                    ||.|.|.| 
 Worm    97 SSSIFLFT---PRVLGKLIDEWDETKQDK-MDPNDK--------------------ALLLARFFK 137

  Fly   789 -------GFFFM----------CLRIS--LTLHD---QLYHGIIRAWMYFFNANPSGRVLNRFSS 831
                   |.|.:          |:..:  |.::|   .:::.::|..|.||:.|..|.:::|.|:
 Worm   138 ENPIALAGVFMLGAIAIAARIYCMHTAGQLVINDLRKSVFNSVLRQDMAFFDKNKVGEIVSRLST 202

  Fly   832 DIQNVDVNLPQAMMDSLQFLVDVV---AVLVIVAIAN---YWLLIPAAIMVILLYFCRALYIGAS 890
            |...|..::...:.|..:.|:...   .::|..::|.   .::::|..:....::          
 Worm   203 DALIVGYSVSMNLSDGARALITCFGSGGLMVYTSLAMCKVIFVVVPVIVGTFAVF---------- 257

  Fly   891 RSLKRIESLTRSPIYSHTNQTFHGH-STIRSMDAMPQLEQTFHGHQNTNSSALFLYVSANRAFSF 954
            ..|:|..:|......:..||..... |::|::.                     :.|:..:..:.
 Worm   258 GKLQRKYTLMMQEAVAGANQVATERLSSVRTVR---------------------MLVAERKELAA 301

  Fly   955 WTDLICVIYI------LAVTFSF--------LVINQ-SFYSGDVGLAITQSM----TLVIMCQWG 1000
            ::|.|..|:.      ||..|.|        |.::. .||..::   |:|.:    .|...|.:.
 Worm   302 YSDKINEIWQISKKEGLAKGFMFGSFQFTGYLALSSILFYGSNL---ISQGLLTYGELSSFCLYA 363

  Fly  1001 MRQTA----------EMENNMTSVERVLEYAQTPSEPPLESPKSVNLAAEWPQAGHLRFQDLRMR 1055
            :....          |:...:.:..|:.|........|||....:....:     .:||:.:...
 Worm   364 VLSAGSLSAMSGFYLELMKGLGASSRLFELKNREPRIPLEGGVQIGNVKD-----TIRFEHVAFG 423

  Fly  1056 YSPGDEDILRGLNFESQPMEKI-GIVGRTGAGKSSIIQALFRL-ALNEGTIEIDGLDIGKLGLHD 1118
            |:..| .:...::|: .|..|| .:||.:|:|||:|...|.|| ....|.|.:||.|:..:....
 Worm   424 YADRD-PLFHNISFD-VPAGKITAVVGSSGSGKSTIASLLLRLYDPTSGRILVDGTDLKDIDPSY 486

  Fly  1119 LRSRISIIPQDPVLFSGTLRFN-----LDPFDEKSDESLWSALDDVKLKKHVASLEGGLSCRMQD 1178
            .|..|..:.|:|||||.|::.|     |:| :..:|..:.||.|.....:.::........::.:
 Worm   487 WRRHIGTVGQEPVLFSTTIKENIIYGSLEP-ENVTDAEIVSAADQSNADEFISRFPIKYDTKVGE 550

  Fly  1179 GGSNFSMGQRQLVCLARAILRQNRVLVMDEATANVDTETDILIQETIQTKFAEC--TVLTIAHRL 1241
            .||..|.||:|.:.:|||::.:..:|:|||||:.:|..::.|::..:....|..  ||:.|||||
 Worm   551 HGSTLSGGQKQRIAIARALVNKPNILIMDEATSALDASSEYLVRIALNKLLANSKQTVMIIAHRL 615

  Fly  1242 HTVMDNDSVLVMDAGQIVEFGAPHKLLQRKDGALLKLVNQ 1281
            .|:...|.::|:|.|.:.|.|:..:|:...||...|||.:
 Worm   616 STIKHADQIVVVDRGSVAESGSYDELIAIPDGIFRKLVEK 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10505NP_611571.2 CFTR_protein 12..1268 CDD:273530 145/675 (21%)
ABC_membrane 95..360 CDD:294371
ABCC_MRP_domain1 428..632 CDD:213217
ABC_membrane 728..994 CDD:294371 52/314 (17%)
ABCC_MRP_domain2 1045..1264 CDD:213211 71/227 (31%)
haf-3NP_506927.2 MdlB 70..657 CDD:224055 145/667 (22%)
ABC_membrane 96..366 CDD:279056 55/327 (17%)
P-loop_NTPase 415..656 CDD:304359 77/244 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.