DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10505 and pgp-1

DIOPT Version :9

Sequence 1:NP_611571.2 Gene:CG10505 / 37428 FlyBaseID:FBgn0034612 Length:1312 Species:Drosophila melanogaster
Sequence 2:NP_502413.1 Gene:pgp-1 / 178215 WormBaseID:WBGene00003995 Length:1321 Species:Caenorhabditis elegans


Alignment Length:1352 Identity:321/1352 - (23%)
Similarity:573/1352 - (42%) Gaps:295/1352 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 RLIFKVYGWQFVPVCILYSLLEM------AIHSFQPLLLGGLISYFAYGQTTVTKESAYLYAM-- 136
            :::....|..|:|....|:..:.      .:.|:..:.:|    .:|.||.|||   .|||..  
 Worm   109 QIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVG----MWAAGQITVT---CYLYVAEQ 166

  Fly   137 --GIVLCSLVTSLVFHPFMFYVFAVGTRVRLACAGLVYRKCLRASASSGEGLGGQAISVMSID-L 198
              ..:....|.|::.....::    .|......|..::....|....:|:.:|      |:.. |
 Worm   167 MNNRLRREFVKSILRQEISWF----DTNHSGTLATKLFDNLERVKEGTGDKIG------MAFQYL 221

  Fly   199 SQFDLTFYFFHDLWKGPVEACIFGYLMTRQVGW-TSLIGIAFIVILIPLQAWA----AKASASFG 258
            |||                  |.|:::.....| .:|:.:|    :.|:||..    ||:.::|.
 Worm   222 SQF------------------ITGFIVAFTHSWQLTLVMLA----VTPIQALCGFAIAKSMSTFA 264

  Fly   259 TRSAKHRDARVKLMNEIIGAIQ-VIKMYAWEKSFGRLIAAVRQSEVKAIRGSMSI---YAALQCT 319
            .|.........|::.|.|.:|: |:.:........|...||.:::...:...:.:   :.|:|.:
 Worm   265 IRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQAS 329

  Fly   320 NMISKISLFLSLVAYVYVGD------LVTAKKVFILSSYYGLLNDSLLHYWPMAITTWAQTLVSA 378
            |.||....|...|.:|:.|.      |.|...|.:.|...||....|      |:...||...|.
 Worm   330 NFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQL------AVLGTAQGAASG 388

  Fly   379 RRVVEFLLQVEKPTEESCCRDNPGLELDAEKPKPAQSGRLHCVQSETKC---LSFRKVSASWDKP 440
              :.|.|  ..||..:|                .:::||     .:.|.   ::...|..::  |
 Worm   389 --IYEVL--DRKPVIDS----------------SSKAGR-----KDMKIKGDITVENVHFTY--P 426

  Fly   441 SIKQPRKPHIEGISFHINAGQFVGIVGNVGSGKSTLLHAILGEIELMQGRVEVHG---------- 495
            |  :|..|.:.|::..:||||.|.:||:.|.||||::..:|...::::|::.:.|          
 Worm   427 S--RPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEF 489

  Fly   496 ---RISYAAQQPWVFQGSIRENILFVEQ---YEEKRYRAVVHACQL---DRDLELLPRGDATVVG 551
               .::..:|:|.:|..:|.|||...::   .||     :|.||::   ::.::.||.|..|:||
 Worm   490 LRKNVAVVSQEPALFNCTIEENISLGKEGITREE-----MVAACKMANAEKFIKTLPNGYNTLVG 549

  Fly   552 ERGISLSGGQKARIALARAVYRQADIYLFDDPLAAVDAQVGKLLMDKCFHRLLDGKMRILVTHHV 616
            :||..||||||.|||:|||:.|...|.|.|:..:|:||: .:.::.:...:...|:..|::.|.:
 Worm   550 DRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAE-SEGIVQQALDKAAKGRTTIIIAHRL 613

  Fly   617 QLLKSVDQLLLLEGGK----------LTQQGSYEELKDVITHHAALD--LEAIEADKQQVKRVLS 669
            ..:::.|.::..:.|:          :.|||.|.:|....|...|:|  .|...:.:..|.|..|
 Worm   614 STIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTS 678

  Fly   670 QVDRTSKQLSKG---------------------EEKDPATIQDENGNAEQQLQ--GAVSYDTYKA 711
            :.:..|:|.|:.                     :||:....:|.....:|:|:  .|...:.::.
 Worm   679 EHEGLSRQASEMDDIMNRVRSSTIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEI 743

  Fly   712 YFRALGAPFLVCLVLSMFVLARG----------CQAVMDIFISRWATWEEDRGYDSVDDYEATRT 766
            .:.|  .|..:.|.:.|.....|          ..:.|::|....|.: ..:|:           
 Worm   744 LYHA--RPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADF-LSQGH----------- 794

  Fly   767 KMVIWYTVLLLLTLALFLLRTFGFFFMCLRI-SLT--LHDQLYHGIIRAWMYFFNA--NPSGRVL 826
               .|..:.|:|..|..:......|||.:.. |||  |.::|:..::...:.||::  |.||::.
 Worm   795 ---FWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKIS 856

  Fly   827 NRFSSDIQNVDVNLPQAMMDSLQFLVDVVAVLVIVAIANYWL-LIPAAIMVILLYFCRALYIGAS 890
            .|.::|:.|:...:.......:..||.:||.:.:.....:.: |:..||:.|:.:   ..|:...
 Worm   857 TRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAF---GQYLRGR 918

  Fly   891 R-SLKRIESLTRSPIYSHTNQ-TFHGHSTIRSMDAMPQLEQTFH---------GHQNTNSSALFL 944
            | :.|.::|.:.   ::.:.: .......:|::.|:.: |.||:         .|:.....|...
 Worm   919 RFTGKNVKSASE---FADSGKIAIEAIENVRTVQALAR-EDTFYENFCEKLDIPHKEAIKEAFIQ 979

  Fly   945 YVSANRAFSFWTDLICVIYILAVTFSFLVINQSFYSGDVGLAITQSMTLVIMCQWGMRQTAEMEN 1009
            .:|...|.|       |:|:|         |...|...:.|.||...|:..|             
 Worm   980 GLSYGCASS-------VLYLL---------NTCAYRMGLALIITDPPTMQPM------------- 1015

  Fly  1010 NMTSVERVLE--YAQTPSEPPL--------ESPK-------------------SVNLAAEWPQA- 1044
                  |||.  ||.|.|...|        |..|                   |::||.|..:. 
 Worm  1016 ------RVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLAGEKKKLY 1074

  Fly  1045 GHLRFQDLRMRYSPGDE-DILRGLNFESQPMEKIGIVGRTGAGKSSIIQALFRL--ALNEGTIEI 1106
            |.:.|:::|..|....| :||:||:|..:|.:.:.:||.:|.|||:::..|.|.  .|. |.|.|
 Worm  1075 GKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLG-GEIFI 1138

  Fly  1107 DGLDIGKLGLHDLRSRISIIPQDPVLFSGTLR----FNLDPFDEKSDESLWSALDDVKL---KKH 1164
            ||.:|..|.....||:|:|:.|:|.||..::.    :.|||    |..::....:..:|   ...
 Worm  1139 DGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDP----SSVTMAQVEEAARLANIHNF 1199

  Fly  1165 VASLEGGLSCRMQDGGSNFSMGQRQLVCLARAILRQNRVLVMDEATANVDTETDILIQETIQTKF 1229
            :|.|..|...|:.|.|:..|.||:|.:.:|||::|..::|::||||:.:|||::.::||.:....
 Worm  1200 IAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAR 1264

  Fly  1230 AECTVLTIAHRLHTVMDNDSVLVMDAGQIVEFGAPHKLLQRKDGALLKLVNQ 1281
            ...|.:.|||||:|||:.|.:.|:..|.|:|.|. |..|..:.||..||..:
 Worm  1265 EGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGT-HTQLMSEKGAYYKLTQK 1315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10505NP_611571.2 CFTR_protein 12..1268 CDD:273530 316/1337 (24%)
ABC_membrane 95..360 CDD:294371 59/290 (20%)
ABCC_MRP_domain1 428..632 CDD:213217 64/222 (29%)
ABC_membrane 728..994 CDD:294371 57/292 (20%)
ABCC_MRP_domain2 1045..1264 CDD:213211 79/228 (35%)
pgp-1NP_502413.1 PTZ00265 38..1311 CDD:240339 319/1346 (24%)
ABC_membrane 81..367 CDD:279056 59/296 (20%)
ABC_MTABC3_MDL1_MDL2 416..653 CDD:213216 70/246 (28%)
ABC_membrane 760..1028 CDD:279056 63/324 (19%)
ABC_MTABC3_MDL1_MDL2 1077..1316 CDD:213216 84/245 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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