DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10505 and haf-4

DIOPT Version :9

Sequence 1:NP_611571.2 Gene:CG10505 / 37428 FlyBaseID:FBgn0034612 Length:1312 Species:Drosophila melanogaster
Sequence 2:NP_001021666.1 Gene:haf-4 / 171639 WormBaseID:WBGene00001814 Length:787 Species:Caenorhabditis elegans


Alignment Length:573 Identity:145/573 - (25%)
Similarity:263/573 - (45%) Gaps:103/573 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   773 TVLLLLTLALFLLRTFGFFFMCLRISLTLHDQLYHGIIRAWMYFFNANPSGRVLNRFSSDIQ--- 834
            |::.|::......|...|.:...||...:...|:||:::..:.|::|:.:|.|.:|.::|.|   
 Worm   227 TIISLVSAVAAGFRGGSFEYAYARIQRAIRYDLFHGLVKQDVAFYDAHKTGEVTSRLAADCQTMS 291

  Fly   835 -----NVDVNLPQAMM--DSLQFLVDVVAVLVIVAIANYWLLIPAAIMVILLYFCRALYIGASRS 892
                 ||:|.|...:|  .|:.|::.:           .|.|.....:::.:.|..:...|....
 Worm   292 DTVALNVNVFLRNCVMLLGSMIFMMKL-----------SWRLSLVTFILVPIIFVASKIFGTYYD 345

  Fly   893 LKRIESLTRSPIYSHTN---QTFHGHSTIRSMDAMPQLEQTFHGHQNTNSSALFLYVSANRAFSF 954
            |  :...|:..|....:   :......|:||..........|:| :.|::    |.|:..:|.::
 Worm   346 L--LSERTQDTIAESNDVAEEVLSTMRTVRSFSCENVEADRFYG-KLTHT----LDVTRTKAIAY 403

  Fly   955 WTDLICVIYILAVTFSFLVINQSFYSGDVGLAITQSMT-------LVIMCQWG--MRQTAEMENN 1010
                |..:::..:..||::::..:|.|.  |.:||.|.       |:...|.|  :||..|:...
 Worm   404 ----IGFLWVSELFQSFIIVSVLWYGGH--LVLTQKMKGDLLVSFLLYQMQLGDNLRQMGEVWTG 462

  Fly  1011 -MTSV---ERVLEYAQTPSEPPLE-----SPKSVNLAAEWPQAGHLRFQDLRMRY-SPGDEDILR 1065
             |.||   .:|.||..  .||.::     .|::|        .|.:.|:::...| :..|:.||:
 Worm   463 LMQSVGASRKVFEYID--REPQIQHNGEYMPENV--------VGKIEFRNVHFSYPTRSDQPILK 517

  Fly  1066 GLNFESQPMEKIGIVGRTGAGKSSIIQALFRLAL-NEGTIEIDGLDIGKLGLHDLRSRISIIPQD 1129
            .|:|..:|.|.:.:||.:|:||||.|..|....: |.|.:.:||:.:.:...|.:..:|:::.|:
 Worm   518 DLSFTVEPGETVALVGPSGSGKSSCISLLENFYVPNAGQVLVDGVPLEEFEHHYIHKKIALVGQE 582

  Fly  1130 PVLFSGTLRFNLDPFDEKSDESLWSALDDVKLKKHVASLEGGLSCRMQDG--------------- 1179
            ||||:.                  |.:::|:....||..|...||.|.:.               
 Worm   583 PVLFAR------------------SVMENVRYGVEVADTEIIRSCEMANAHGFIMQTTLKYETNV 629

  Fly  1180 ---GSNFSMGQRQLVCLARAILRQNRVLVMDEATANVDTETDILIQETIQTKFAECTVLTIAHRL 1241
               |:..|.||:|.:.:|||::|:..:|::||||:.:|||::.|:||.|.......:|:.|||||
 Worm   630 GEKGTQMSGGQKQRIAIARALVREPAILLLDEATSALDTESEHLVQEAIYKNLDGKSVILIAHRL 694

  Fly  1242 HTVMDNDSVLVMDAGQIVEFGAPHKLLQRKDGALLKLVNQNDATTVKFLKRIA 1294
            .||...|.::|::.|::.:.|....||:..:|...|||.:......|..||.|
 Worm   695 STVEKADKIVVINKGRVEQIGNHETLLKDTNGTYAKLVQRQMMGDQKPRKRPA 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10505NP_611571.2 CFTR_protein 12..1268 CDD:273530 135/545 (25%)
ABC_membrane 95..360 CDD:294371
ABCC_MRP_domain1 428..632 CDD:213217
ABC_membrane 728..994 CDD:294371 48/240 (20%)
ABCC_MRP_domain2 1045..1264 CDD:213211 71/238 (30%)
haf-4NP_001021666.1 3a01208 16..732 CDD:273363 139/556 (25%)
ABC_membrane 189..449 CDD:279056 49/245 (20%)
ABC_MTABC3_MDL1_MDL2 498..735 CDD:213216 76/254 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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