DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10505 and abcc10

DIOPT Version :9

Sequence 1:NP_611571.2 Gene:CG10505 / 37428 FlyBaseID:FBgn0034612 Length:1312 Species:Drosophila melanogaster
Sequence 2:NP_001135594.1 Gene:abcc10 / 100216149 XenbaseID:XB-GENE-6465377 Length:1501 Species:Xenopus tropicalis


Alignment Length:1356 Identity:437/1356 - (32%)
Similarity:711/1356 - (52%) Gaps:158/1356 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SPKRESNPFIKANIISKWLFLWMHSVFRKGRR-------------EELDASKLYEHLPSFDSESL 59
            :|:|:.......:.:|::.:||::.:.|:|.|             ..|..:::.:|..|..|.::
 Frog   217 TPERQHPAEDGESWLSRFFYLWLNPLLRQGARGGLKHPGDVLLLPHCLGTARICQHFQSKSSSTI 281

  Fly    60 TRNLQPHWEKESKKKNPSLMRLIFKVYGWQFVPVCILYSLLEMAIHSFQPLLLGGLISYFAYGQT 124
            .|                |:..:...:|.::..:.:| .|..:.:....||||..|:::......
 Frog   282 LR----------------LLPTLHASFGARYYALGLL-KLGAVTLAFLGPLLLNLLVNFMEAADE 329

  Fly   125 TVTKESAYLYAMGIVLCSLVTSLVFHPFMFYVFAVGTRVRLACAGLVYRKCLRASASSGEGLG-- 187
            .::  ...||.:|:.....:.:|:.:.|...|..:...||.:....||||.:|   ..|.||.  
 Frog   330 PLS--WGILYTLGLFSSCFLAALLQNQFTHEVNKLILAVRASVLTSVYRKAIR---GVGTGLAGF 389

  Fly   188 --GQAISVMSIDLSQFDLTFYFFHDLWKGPVEACIFGYLMTRQVGWTSLIGIAFIVILIPLQAWA 250
              |:.::.||.|..:.......||::|..|::..:..||:..|||...|.|:...|:|:|:....
 Frog   390 SKGEIVNFMSTDADRISNFCRSFHEVWSLPLQFSVTLYLLYLQVGIAFLGGLGLAVLLLPINKVI 454

  Fly   251 AKASASFGTRSAKHRDARVKLMNEIIGAIQVIKMYAWEKSFGRLIAAVRQSEVKAIRGSMSIYAA 315
            |.....:.:....|:|||||||.|::..::|:|.|.|||.|...:.::|:.|::::|....:.|.
 Frog   455 ANRIVDYNSDLLNHKDARVKLMTELLSGMRVVKFYTWEKHFAEAVTSLREKELRSLRALKMLDAV 519

  Fly   316 LQCTNMISKISLFLSL---VAYVYVGDLVTAKKVFILSSYYGLLNDSLLHYWPMAITTWAQTLVS 377
              |..:.:.:.:.:|:   :.||.:|..:||.|||...:..|:|...|.:: |..:....:..||
 Frog   520 --CVYLWAALPVLISIITFITYVLLGHQLTAAKVFTALALVGMLILPLNNF-PWVLNGVLEAKVS 581

  Fly   378 ARRVVEFLLQVEKPTEESCCRDNPGLELDAEKPKPAQSGRLHCVQSETKCLSFRKVSASW----- 437
            ..|:..|:   :.|.::.       |...:::| ||         ..:..|..|..:.||     
 Frog   582 LERIQLFM---DLPEQDL-------LNYYSQEP-PA---------DPSSALELRSAAFSWMPEES 626

  Fly   438 -DKPSIKQPRKPHIEGISFHINAGQFVGIVGNVGSGKSTLLHAILGEI-----ELMQGRVEVHGR 496
             |..|::.    .||.:|  :..|..||:||.||.|||:||.|:.||:     ||.....|:  .
 Frog   627 EDSGSLQL----FIEHLS--VQKGVLVGVVGKVGCGKSSLLAALTGELSRSGGELFASHQEL--G 683

  Fly   497 ISYAAQQPWVFQGSIRENILFVEQYEEKRYRAVVHACQLDRDLELLPRGDATVVGERGISLSGGQ 561
            ..:|||:||:...:|||||||.:::..|.|:.|:.||.|:.||.:||.||.|.|||.|::|||||
 Frog   684 FGFAAQEPWIQFATIRENILFGKEFNGKLYQGVLEACALNDDLSILPSGDQTEVGENGVTLSGGQ 748

  Fly   562 KARIALARAVYRQADIYLFDDPLAAVDAQVGKLLMDKCFHRLLDGKMRILVTHHVQLLKSVDQLL 626
            |||:|||||||:..||||.|||||||||.|...||:||...:|..|.|||.||..:||...|.:|
 Frog   749 KARLALARAVYQDKDIYLLDDPLAAVDADVAAHLMEKCILGILKNKTRILCTHRTELLDKADIVL 813

  Fly   627 LLEGGKLTQQGSYEELKDVITHHAALDLEAIEADKQQVKRVLSQVDRTSKQLSKGEEKDPATIQD 691
            |:||||:...|:.:::           |..:|:.:.:..|..:|::..|:...:..|:|....::
 Frog   814 LMEGGKMVGSGTPDKI-----------LPLVESSRNRGSRGQTQMNHISQAAEQSLEEDEEEAEN 867

  Fly   692 ENGN----------AEQQLQGAVSYDTYKAYFRALGAPFLVCLVLSMFVLARGCQAVMDIFISRW 746
            | ||          .|::.:|||:...|.||::|:|......::|::| |.:..:.:.|.::|.|
 Frog   868 E-GNPIQPITAEVGQEEKQEGAVALQVYWAYWKAVGGCLAGSVLLALF-LMQASRNISDWWLSHW 930

  Fly   747 ATWEED------------------------RG-----YDSVDDYEATRTKMVIWYTVL---LLLT 779
            .:..:|                        :|     ..||...|...:..:.:|..:   :.:.
 Frog   931 ISSLQDSPRNVSLTNLTPSSFPSASLLLFSQGGLVSPISSVHSAEKNSSLDITFYLSVYGGIAVA 995

  Fly   780 LALF-LLRTFGFFFMCLRISLTLHDQLYHGIIRAWMYFFNANPSGRVLNRFSSDIQNVDVNLPQA 843
            .::| .||.|.|....:..::.:|.:|...:::|.:.||::.|.||::||||||:..||.:||..
 Frog   996 NSIFTALRAFLFALGTVHAAVVIHRRLLSSVLQATVSFFDSTPIGRIINRFSSDLYCVDDSLPFV 1060

  Fly   844 MMDSLQFLVDVVAVLVIVAIANYWLLIPAAIMVILLYFCRALYIGASRSLKRIESLTRSPIYSHT 908
            :...|.|...::.:||:::....|:|.....:.:|.|:.:..|..:||.|||::|:|.||||:|.
 Frog  1061 LNIFLAFTFGLLGMLVMISYGLPWILPVLLPLCLLYYYLQRFYRHSSRELKRLQSITLSPIYTHF 1125

  Fly   909 NQTFHGHSTIRSMDAMPQLEQTFHGHQNTNSSALFLYVSANRAFSFWTD----LICVIYILAVTF 969
            ::|..|.:|||:.....:.|.........|...:|    |:.|...|.|    :|.|:.:.|::.
 Frog  1126 SETLTGLTTIRATRHADRFEAECVSRLEVNQRCMF----ASNAAVQWLDIRLQMIGVMVVAAISV 1186

  Fly   970 SFLVINQSFYSGD---VGLAITQSMTLVIMCQWGMRQTAEMENNMTSVERVLEYAQT-PSEPPLE 1030
             ..:|.....|||   ||||::.::::..:....:....:.|..|.||||..||:.| |||   .
 Frog  1187 -IAIIQHQRKSGDPGLVGLALSYALSITGILSGLISSFTQTEAMMVSVERTEEYSTTLPSE---S 1247

  Fly  1031 SPKSVNLAAEWPQAGHLRFQDLRMRYSPGDEDILRGLNFESQPMEKIGIVGRTGAGKSSIIQALF 1095
            :..|:.:..:||..||:.|:::.:.|..|..:.|.|::|...|.||||||||||:|||::..|||
 Frog  1248 AEGSLQVELDWPTNGHIEFRNVVLCYRLGLPNALDGISFTISPGEKIGIVGRTGSGKSTLFLALF 1312

  Fly  1096 R-LALNEGTIEIDGLDIGKLGLHDLRSRISIIPQDPVLFSGTLRFNLDPFDEKSDESLWSALDDV 1159
            | :.|.||:|.||.:....|.|..||||::|||||..||||::|.||||....:|..:...||..
 Frog  1313 RMMELKEGSILIDNVPSHLLNLELLRSRLAIIPQDAFLFSGSVRVNLDPLSYHTDVEILKVLDQC 1377

  Fly  1160 KLKKHVASLEGGLSCRMQDGGSNFSMGQRQLVCLARAILRQNRVLVMDEATANVDTETDILIQET 1224
            .|:..|..: |||...:.|.|.|||:|||||:|||||:|...::|.:|||||:||.:||.|:|.|
 Frog  1378 HLQDVVRRI-GGLDADVGDRGKNFSLGQRQLLCLARALLTHAKILCIDEATASVDHQTDELLQRT 1441

  Fly  1225 IQTKFAECTVLTIAHRLHTVMDNDSVLVMDAGQIVEFGAPHKLLQRKDGALLKLVN 1280
            |:.:|.|.|||||||||:|:||:|.||||.||::||..:|..|.:|:|....:|::
 Frog  1442 IRERFRERTVLTIAHRLNTIMDSDRVLVMHAGKLVELDSPANLSKREDSNFYRLIH 1497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10505NP_611571.2 CFTR_protein 12..1268 CDD:273530 431/1338 (32%)
ABC_membrane 95..360 CDD:294371 74/271 (27%)
ABCC_MRP_domain1 428..632 CDD:213217 103/214 (48%)
ABC_membrane 728..994 CDD:294371 78/305 (26%)
ABCC_MRP_domain2 1045..1264 CDD:213211 113/219 (52%)
abcc10NP_001135594.1 MRP_assoc_pro 180..1484 CDD:188098 433/1341 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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