DRSC/TRiP Functional Genomics Resources

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Protein Alignment MFS16 and garP

DIOPT Version :9

Sequence 1:NP_726048.1 Gene:MFS16 / 37427 FlyBaseID:FBgn0034611 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_417596.1 Gene:garP / 947642 ECOCYCID:EG12760 Length:444 Species:Escherichia coli


Alignment Length:522 Identity:107/522 - (20%)
Similarity:195/522 - (37%) Gaps:147/522 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 HARRDLLYKMSVFVLTFLAYACYHMCRKPISVVKSVLQGNCSTALAASGQDCGYAPFDVPDATTL 141
            |.|  .|..:.:|::|.:.||    .|..:|:..:    ..:..|..|....||           
E. coli    14 HTR--YLILLIIFIVTAVNYA----DRATLSIAGT----EVAKELQLSAVSMGY----------- 57

  Fly   142 FGMLDSAFLFSYAIAMFASGFVAERVSLRYFLSMGMILTGVFTY------MFGIARTSNIHSLWY 200
               :.|||.::|.:.....|::.::...:...:..:....:||:      ||.:|        |.
E. coli    58 ---IFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLA--------WA 111

  Fly   201 FI---IVQIFAGIFQTTGWPGVVALVGRWFGKSKRGLIFGIWNS--HTSI---GNILGTLIAAHY 257
            .|   .::...|..:...:|....:|..||...:||....|:||  :.|:   ..:||.|..|. 
E. coli   112 GISMFFMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAW- 175

  Fly   258 VESDWALSFVVPGIIIAAVGFL---LFLFLVDQPEIVGCYPQAGQHERRVANESD--VEQDDEEQ 317
               .|...|.|.|:|    ||:   |::.|:..|.   .:|:....|.:..:|:.  |:.|.:: 
E. coli   176 ---GWEHVFTVMGVI----GFVLTALWIKLIHNPT---DHPRMSAEELKFISENGAVVDMDHKK- 229

  Fly   318 VRHNDAEINYRSAPTERTPILPRSQPEAVPRGRGRPISLIDALFIPGVVEFSLCL------FFTK 376
                                 |.|...:.|:          ..:|..::...:.|      :|..
E. coli   230 ---------------------PGSAAASGPK----------LHYIKQLLSNRMMLGVFFGQYFIN 263

  Fly   377 LVSYTFMYWLPLYIQKS---STLGPELSADLSTLFD-VGGILGAIAAGYLSDVSGMSAT------ 431
            .:::.|:.|.|:|:.:.   |.|...|.|.:..|.. .||:||.:.:.||.. .|:|.|      
E. coli   264 TITWFFLTWFPIYLVQEKGMSILKVGLVASIPALCGFAGGVLGGVFSDYLIK-RGLSLTLARKLP 327

  Fly   432 VCTGMLFVASPILLMYQQYGALSMTISIVLLIVVGIFVNGPYAL----ITTSVSAELGQHSSLEG 492
            :..|||..::.||..|     .:.|..:|:|:.:..|..|..||    |:.:...|:        
E. coli   328 IVLGMLLASTIILCNY-----TNNTTLVVMLMALAFFGKGFGALGWPVISDTAPKEI-------- 379

  Fly   493 NANALATVTAIIDGTGSIGAAVGPLLAG-LIS--------------TAGWQYVFHMLIAADIIAM 542
                :.....:.:..|::.:.|.||:.| |:|              :|....|.::.:..||..|
E. coli   380 ----VGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNAALVFVGCSALMAMVCYLFVVGDIKRM 440

  Fly   543 VL 544
            .|
E. coli   441 EL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS16NP_726048.1 UhpC 84..545 CDD:225180 104/515 (20%)
MFS 139..549 CDD:119392 94/460 (20%)
garPNP_417596.1 2A0114 25..434 CDD:273326 99/499 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
10.910

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