DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyg and GLG1

DIOPT Version :9

Sequence 1:NP_001286666.1 Gene:Gyg / 37419 FlyBaseID:FBgn0265191 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_012984.2 Gene:GLG1 / 853932 SGDID:S000001766 Length:616 Species:Saccharomyces cerevisiae


Alignment Length:651 Identity:166/651 - (25%)
Similarity:260/651 - (39%) Gaps:147/651 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFAWVTLTTNDTYSLGALVLAHSLKR------AKTAHQLAVLVTPN-----VSQAMRDRLKEVYN 56
            |.|..||..:..|..|...|.|.:.:      .|...:..::||.:     :|:..::.|:.:|.
Yeast     4 KLAIATLLYSADYLPGVFALGHQVNKLLEEAGKKGDIETCLIVTTSLFNGTLSELAKNILQSIYT 68

  Fly    57 VVQEVNVLDSQD------AANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVL-QNCDEL 114
            .:..|..|:.|:      :.|||||.||||.....|...|.|.|||:.::||:|||.| :...:|
Yeast    69 KIVLVEPLNCQEESIQKNSENLALLERPELSFALIKARLWELTQFEQVLYLDSDTLPLNKEFLKL 133

  Fly   115 FE------REELSAAPDVSWPDCFNSGVFVFKPSVDTFAQITEFAVKNGSFDGGDQGLLNQFF-A 172
            |:      ..::.|..|:.|||.|||||.:..|..||.:.:..:..:|.|.||.|||:||||| .
Yeast   134 FDIMSKQTTSQVGAIADIGWPDMFNSGVMMLIPDADTASVLQNYIFENTSIDGSDQGILNQFFNQ 198

  Fly   173 DWSTADIKK--------HLPFVYNVT-AYASYCYLPAFKQFRDKIKILHFAGKLKPWLI--QFNS 226
            :..|.::.|        .|.|.|||| ....|...||...|:..||::||.||.|||.:  |.| 
Yeast   199 NCCTDELVKDSFSREWVQLSFTYNVTIPNLGYQSSPAMNYFKPSIKLIHFIGKHKPWSLWSQKN- 262

  Fly   227 ETKVASVSSEYAHAQDLIQLWWNIFCENVIQ--SLSTEMQTPGNVASDR-------------PAG 276
                 .:.:|| |.|      ||...|...:  .|:.|:..|....||:             |:.
Yeast   263 -----FIKNEY-HDQ------WNEVYEEFKEEHQLNNEVSKPKISDSDKTETPETITPVDAPPSN 315

  Fly   277 EMA--QGSTTLECLCLNIIRTQSEFAADELHQRQQH-----------EFYQQQKLHHHLLH--VR 326
            |..  |...|:..:..|:....:|...:..|....:           .|..:.    ||.:  |.
Yeast   316 EPTTNQEIDTISTVEENVDNQNAEPVPNSDHSPAPNPVPLDFTKWLTTFINKD----HLTNQPVN 376

  Fly   327 QFRDPWADYYENLEKEPQEQEQEQQRHQHQQQHHNPSQNHSQDNGNADAAAHENDSTIANA--NA 389
            :.|:...:...|:......::||...:..|:.:.:.|...:|.:.:....|.|.|||..||  :.
Yeast   377 ESREYSKENDNNIINSSSNRDQESPPNSTQELNSSYSVVSTQADSDEHQNAEEEDSTTDNASNSG 441

  Fly   390 TDWHHDDACHPPAPTRPLPQIQNQAHNANATANAED---FSFVDVNSNELNIS-----QPPEHAS 446
            .:.|.||             |...|.:.|..:|..|   ||    ||.|.|||     ..||...
Yeast   442 EESHLDD-------------ISTAASSNNNVSNQPDGKNFS----NSKENNISVESSPSNPEQKR 489

  Fly   447 YSSDTATPTATATPTATPTLTPTPHHSV--HSQTVEKATSHQQEHEVAATTPPEAGLAGALSQLR 509
            .:.:...|:.:........   .||.||  :.|.:||.....:|.      .|:...:.|:..  
Yeast   490 STDNIQKPSVSTNDLPDDV---EPHTSVDDNIQYLEKDKEGYEEF------LPDVYESNAIDN-- 543

  Fly   510 IGQQRTPEQEAYENQMRRQCWESGQIDYTGADSFENIWKKISQTLERKTDKE--SEETDNDNDSD 572
                   |:|.:::..|         |.|..::      |.|...:::.|.:  :|||:......
Yeast   544 -------EEEFFDDDAR---------DATEGET------KTSAVADKQEDMKLTAEETNQPQQEM 586

  Fly   573 P 573
            |
Yeast   587 P 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GygNP_001286666.1 GT8_Glycogenin 4..253 CDD:133018 93/284 (33%)
RfaJ <94..251 CDD:224359 65/175 (37%)
GLG1NP_012984.2 GT8_Glycogenin 6..279 CDD:133018 94/285 (33%)
MSCRAMM_ClfB <295..587 CDD:411414 67/345 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I1156
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I1240
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001116
OrthoInspector 1 1.000 - - otm46515
orthoMCL 1 0.900 - - OOG6_101901
Panther 1 1.100 - - O PTHR11183
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2133
SonicParanoid 1 1.000 - - X386
TreeFam 00.000 Not matched by this tool.
98.990

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