DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyg and PGSIP4

DIOPT Version :10

Sequence 1:NP_001286666.1 Gene:Gyg / 37419 FlyBaseID:FBgn0265191 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_175891.1 Gene:PGSIP4 / 841934 AraportID:AT1G54940 Length:557 Species:Arabidopsis thaliana


Alignment Length:280 Identity:72/280 - (25%)
Similarity:124/280 - (44%) Gaps:76/280 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFAWVT-LTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQ-------------AMRDRLKE 53
            :.|:|| |.:::.|..||:.||.|::::.:...:.:|....::.             .:.||::.
plant   270 RVAYVTVLHSSEAYVCGAIALAQSIRQSGSHKDMILLHDHTITNKSLIGLSAAGWNLRLIDRIRS 334

  Fly    54 VYNVVQEVNVLDSQDAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFERE 118
            .::  |:    ||.:..|            ::||..|::..::|.||:|||.::|:..|.||...
plant   335 PFS--QK----DSYNEWN------------YSKLRVWQVTDYDKLVFIDADFIILKKLDHLFYYP 381

  Fly   119 ELSAAPDVSWPD--CFNSGVFVFKPSVDTFAQITEFAVKNGSFDGGDQGLLNQFFADWSTA---- 177
            :|||    |..|  .||||:.|.:||...|..:.|.:.|..|::|||||.||:.|..|...    
plant   382 QLSA----SGNDKVLFNSGIMVLEPSACMFKDLMEKSFKIESYNGGDQGFLNEIFVWWHRLSKRV 442

  Fly   178 ------DIKKH----LPFVYNVTAYASYCYLPAFKQFRDKIKILHFAGKLKPWLIQFNSETKVAS 232
                  |.|.|    ||                     :.::.||:.| ||||:...:.:.. ..
plant   443 NTMKYFDEKNHRRHDLP---------------------ENVEGLHYLG-LKPWVCYRDYDCN-WD 484

  Fly   233 VSSEYAHAQDLI-QLWWNIF 251
            :|.....|.|.: :.||.::
plant   485 ISERRVFASDSVHEKWWKVY 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GygNP_001286666.1 GT8_Glycogenin 4..253 CDD:133018 72/279 (26%)
PGSIP4NP_175891.1 GT8_Glycogenin 271..507 CDD:133018 72/279 (26%)

Return to query results.
Submit another query.