DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyg and PGSIP5

DIOPT Version :10

Sequence 1:NP_001286666.1 Gene:Gyg / 37419 FlyBaseID:FBgn0265191 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_172373.3 Gene:PGSIP5 / 837420 AraportID:AT1G08990 Length:566 Species:Arabidopsis thaliana


Alignment Length:284 Identity:71/284 - (25%)
Similarity:127/284 - (44%) Gaps:82/284 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFAWVTLT-TNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQ-----------AMR--DRLKE 53
            :.|:|||. :::.|..||:.||.|::::.:...:.:|...:::.           .:|  :|::.
plant   277 RVAYVTLLHSSEVYVCGAIALAQSIRQSGSTKDMILLHDDSITNISLIGLSLAGWKLRRVERIRS 341

  Fly    54 VYNVVQEVNVLDSQDAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFERE 118
            .::..:..|..:                  ::||..|::..::|.||:|||.::::|.|.||...
plant   342 PFSKKRSYNEWN------------------YSKLRVWQVTDYDKLVFIDADFIIVKNIDYLFSYP 388

  Fly   119 ELSAAPDVSWPDCFNSGVFVFKPSVDTFAQITEFAVKNGSFDGGDQGLLNQFFADW--------- 174
            :||||.:..  ..|||||.|.:||...|..:...:.|.||::|||||.||::|..|         
plant   389 QLSAAGNNK--VLFNSGVMVLEPSACLFEDLMLKSFKIGSYNGGDQGFLNEYFVWWHRLSKRLNT 451

  Fly   175 -------STADIKKHLPFVYNVTAYASYCYLPAFKQFRDKIKILHFAGKLKPWL----IQFNSET 228
                   |..|..::||                     :.::.:|:.| ||||.    ...|.:.
plant   452 MKYFGDESRHDKARNLP---------------------ENLEGIHYLG-LKPWRCYRDYDCNWDL 494

  Fly   229 KVASV-SSEYAHAQDLIQLWWNIF 251
            |...| :||..||:     ||.::
plant   495 KTRRVYASESVHAR-----WWKVY 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GygNP_001286666.1 GT8_Glycogenin 4..253 CDD:133018 71/283 (25%)
PGSIP5NP_172373.3 GT8_Glycogenin 278..516 CDD:133018 71/283 (25%)

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