DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyg and Gyg1

DIOPT Version :10

Sequence 1:NP_001286666.1 Gene:Gyg / 37419 FlyBaseID:FBgn0265191 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_017446621.1 Gene:Gyg1 / 81675 RGDID:621785 Length:350 Species:Rattus norvegicus


Alignment Length:558 Identity:178/558 - (31%)
Similarity:242/558 - (43%) Gaps:211/558 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKFAWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQEVNVLD 65
            |:..|:|||||||.|:.|||||..|||:.:|..:..||.:|.||.:||..|:.|::.|..|:|||
  Rat     1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRTVVLASPQVSDSMRKVLETVFDEVIMVDVLD 65

  Fly    66 SQDAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFEREELSAAPDVSWPD 130
            |.|:|:|.|:.|||||:|.||||||.|.|:.||||:|||||||.|.|:||||||||||||..|||
  Rat    66 SGDSAHLTLMKRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAAPDPGWPD 130

  Fly   131 CFNSGVFVFKPSVDTFAQITEFAVKNGSFDGGDQGLLNQFFADWSTADIKKHLPFVYNVTAYASY 195
            ||||||||::||::|:.|:...|.:.||||||||||||.:|:.|:|.||.||||||||:::.:.|
  Rat   131 CFNSGVFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDITKHLPFVYNLSSLSIY 195

  Fly   196 CYLPAFKQFRDKIKILHFAGKLKPWLIQFNSETKVASVSSE---YAHAQDLIQLWWNIFCENVIQ 257
            .||||||.|....|::||.|:.|||...:|.:||.....|:   .:| .:.:.|||:.|..||:.
  Rat   196 SYLPAFKAFGKNAKVVHFLGRTKPWNYTYNPQTKSVKCESQDPIVSH-PEFLNLWWDTFTTNVLP 259

  Fly   258 SLSTEMQTPGNVASDRPAGEMAQGSTTLECLCLNIIRTQSEFAADELHQRQQHEFYQQQKLHHHL 322
            .|.                                                          ||.|
  Rat   260 LLQ----------------------------------------------------------HHGL 266

  Fly   323 LHVRQFRDPWADYYENLEKEPQEQEQEQQRHQHQQQHHNPSQNHSQDNGNADAAAHENDSTIANA 387
            :                                                 .||.::         
  Rat   267 V-------------------------------------------------KDAGSY--------- 273

  Fly   388 NATDWHHDDACHPPAPTRPLPQIQNQAHNANATANAEDFSFVDVNSNELNISQPPEHASYSSDTA 452
                               |..:.:..|.                            .::|....
  Rat   274 -------------------LMMLSDLVHT----------------------------LAFSCGFC 291

  Fly   453 TPTATATPTATPTLTPTPHHSVHSQTVEKATSHQQEHEVAATTPPEAGLAGALSQLRIGQQRTPE 517
                                             ::||           :.||||.|..|:.....
  Rat   292 ---------------------------------RKEH-----------VTGALSDLSFGEAPPAS 312

  Fly   518 QEAYENQMRRQCWESGQIDYTGADSFENIWKKISQTLE 555
            |.:..::.|::.||.||.||.|||||:||.:|:...|:
  Rat   313 QPSLSSEERKERWEQGQADYMGADSFDNIKRKLDTYLQ 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GygNP_001286666.1 GT8_Glycogenin 4..253 CDD:133018 141/251 (56%)
Gyg1XP_017446621.1 GT8_Glycogenin 4..254 CDD:133018 140/250 (56%)

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