DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyg and gyg2

DIOPT Version :9

Sequence 1:NP_001286666.1 Gene:Gyg / 37419 FlyBaseID:FBgn0265191 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001011403.1 Gene:gyg2 / 496877 XenbaseID:XB-GENE-5854708 Length:395 Species:Xenopus tropicalis


Alignment Length:555 Identity:187/555 - (33%)
Similarity:262/555 - (47%) Gaps:170/555 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQEVNVLDSQDA 69
            |:|||.|||.|..|||||..||:..||:.||.|::|..|:..|||.|..:::.|.||::|||.|:
 Frog     7 AFVTLGTNDIYCQGALVLGKSLRNHKTSRQLVVMITSQVTSRMRDVLSNIFDEVVEVDILDSADS 71

  Fly    70 ANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFEREELSAAPDVSWPDCFNS 134
            .:|:|:.|||||:||||..||.|.|:.|||::||||:||.|.||||:|:|.|||||..|||||||
 Frog    72 VHLSLMKRPELGITFTKFQCWTLTQYTKCVYMDADTIVLCNIDELFDRDEFSAAPDSGWPDCFNS 136

  Fly   135 GVFVFKPSVDTFAQITEFAVKNGSFDGGDQGLLNQFFADWSTADIKKHLPFVYNVTAYASYCYLP 199
            |||||:|||:||.::..||..:||||||||||||.||::|:||||.|||||:||::..:.|.|.|
 Frog   137 GVFVFRPSVETFHKLLHFAEVHGSFDGGDQGLLNSFFSNWATADISKHLPFIYNLSISSVYTYKP 201

  Fly   200 AFKQFRDKIKILHFAGKLKPWLIQFNSETKVASVSSEYAHAQD---LIQLWWNIFCENVIQSLST 261
            ||.||..:.|::||.|..|||..::|.:|:.. |..|....|:   .:.|||.|:..:::..|:.
 Frog   202 AFLQFGSEAKVVHFLGTPKPWNCKYNPQTRWI-VEDESLSGQEHLSYLVLWWEIYISDILPLLTE 265

  Fly   262 EMQTPGNVASDRPAGEMAQGSTTLECLCLNIIRTQSEFAADELHQRQQHEFYQQQKLHHHLLHVR 326
            :.:|.|                           |.|          |||:..:.:.|        
 Frog   266 QERTDG---------------------------TNS----------QQHQIGRIELL-------- 285

  Fly   327 QFRDPWADYYENLEKEPQEQEQEQQRHQHQQQHHNPSQNHSQDNGNADAAAHENDSTIANANATD 391
                                          .::.|||...:.::...|        .:.::||. 
 Frog   286 ------------------------------VKNENPSSVETPESTPGD--------RLPDSNAE- 311

  Fly   392 WHHDDACHPPAPTRPLP-QIQNQAHNANATANAEDFSFVDVNSNELNISQPPEHASYSSDTATPT 455
             .|...|..|..:..|| |:.|:.                |..:.:.:.|               
 Frog   312 -QHSLDCRGPDQSLELPCQLTNEC----------------VTQDNVQMVQ--------------- 344

  Fly   456 ATATPTATPTLTPTPHHSVHSQTVEKATSHQQEHEVAATTPPEAGLAGALSQLRIGQQRTPEQEA 520
                                                         ||.:.|:|.|.:.   |:||
 Frog   345 ---------------------------------------------LAHSASELSIHES---EEEA 361

  Fly   521 YENQMRRQCWESGQIDYTGADSFENIWKKISQTLE 555
            .....||: ||.|||||.|..|||||.||:.:.|:
 Frog   362 RTEDERRK-WEQGQIDYMGKYSFENIQKKLDRFLQ 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GygNP_001286666.1 GT8_Glycogenin 4..253 CDD:133018 137/250 (55%)
RfaJ <94..251 CDD:224359 89/159 (56%)
gyg2NP_001011403.1 GT8_Glycogenin 6..255 CDD:133018 136/248 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 278 1.000 Domainoid score I1685
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 353 1.000 Inparanoid score I2206
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1424146at2759
OrthoFinder 1 1.000 - - FOG0001116
OrthoInspector 1 1.000 - - otm47544
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X386
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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