DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyg and Gyg

DIOPT Version :9

Sequence 1:NP_001286666.1 Gene:Gyg / 37419 FlyBaseID:FBgn0265191 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001342190.1 Gene:Gyg / 27357 MGIID:1351614 Length:350 Species:Mus musculus


Alignment Length:558 Identity:177/558 - (31%)
Similarity:243/558 - (43%) Gaps:211/558 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKFAWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQEVNVLD 65
            |:..|:|||||||.|:.|||||..|||:.:|..::.||.:|.||.:||..|:.|::.|..|:|||
Mouse     1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRMVVLTSPQVSDSMRKVLETVFDDVIMVDVLD 65

  Fly    66 SQDAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFEREELSAAPDVSWPD 130
            |.|:|:|.|:.|||||:|.||||||.|.|:.||||:|||||||.|.|:||||||||||||..|||
Mouse    66 SGDSAHLTLMKRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAAPDPGWPD 130

  Fly   131 CFNSGVFVFKPSVDTFAQITEFAVKNGSFDGGDQGLLNQFFADWSTADIKKHLPFVYNVTAYASY 195
            ||||||||::||::|:.|:...|.:.||||||||||||.:|:.|:|.||.||||||||:::.:.|
Mouse   131 CFNSGVFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDITKHLPFVYNLSSISIY 195

  Fly   196 CYLPAFKQFRDKIKILHFAGKLKPWLIQFNSETKVASVSSE---YAHAQDLIQLWWNIFCENVIQ 257
            .||||||.|....|::||.|:.|||...:|.:||..:..|:   .:| .:.:.|||:.|..||:.
Mouse   196 SYLPAFKAFGKNAKVVHFLGRTKPWNYTYNPQTKSVNCDSQDPTVSH-PEFLNLWWDTFTTNVLP 259

  Fly   258 SLSTEMQTPGNVASDRPAGEMAQGSTTLECLCLNIIRTQSEFAADELHQRQQHEFYQQQKLHHHL 322
            .|.                                                          ||.|
Mouse   260 LLQ----------------------------------------------------------HHGL 266

  Fly   323 LHVRQFRDPWADYYENLEKEPQEQEQEQQRHQHQQQHHNPSQNHSQDNGNADAAAHENDSTIANA 387
            :.                                                               
Mouse   267 VK--------------------------------------------------------------- 268

  Fly   388 NATDWHHDDACHPPAPTRPLPQIQNQAHNANATANAEDFSFVDVNSNELNISQPPEHASYSSDTA 452
                                                      |.:|..:.:|......::|....
Mouse   269 ------------------------------------------DASSYLMMLSDLVYTLAFSCGFC 291

  Fly   453 TPTATATPTATPTLTPTPHHSVHSQTVEKATSHQQEHEVAATTPPEAGLAGALSQLRIGQQRTPE 517
                                             ::||           ::||||.|..|:.....
Mouse   292 ---------------------------------RKEH-----------VSGALSDLSFGEAPAAP 312

  Fly   518 QEAYENQMRRQCWESGQIDYTGADSFENIWKKISQTLE 555
            |.:..::.|::.||.||.||.|||||:||.:|:...|:
Mouse   313 QPSMSSEERKERWEQGQADYMGADSFDNIKRKLDTYLQ 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GygNP_001286666.1 GT8_Glycogenin 4..253 CDD:133018 141/251 (56%)
RfaJ <94..251 CDD:224359 90/159 (57%)
GygNP_001342190.1 GT8_Glycogenin 4..254 CDD:133018 141/252 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838096
Domainoid 1 1.000 284 1.000 Domainoid score I1626
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31219
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001116
OrthoInspector 1 1.000 - - oto92056
orthoMCL 1 0.900 - - OOG6_101901
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2133
SonicParanoid 1 1.000 - - X386
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.770

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