DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyg and T10B10.8

DIOPT Version :9

Sequence 1:NP_001286666.1 Gene:Gyg / 37419 FlyBaseID:FBgn0265191 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_510518.2 Gene:T10B10.8 / 188365 WormBaseID:WBGene00011684 Length:449 Species:Caenorhabditis elegans


Alignment Length:339 Identity:80/339 - (23%)
Similarity:134/339 - (39%) Gaps:95/339 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFAWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQEVNVLDSQ 67
            |:|:|::.:::.:.:.|.|||:.||:..::....::||.::::...:.||:...:|:....:|:.
 Worm    23 KYAFVSVLSSNDFLIPAKVLAYRLKKLNSSIPYIIIVTQDITEYSINELKQQGVIVRNDTKIDTP 87

  Fly    68 DAANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFEREELSAAPDVSWPDCF 132
                 .:.:.......:||:..|.:.:|:..|.||.|.|..::...|||.....|:  ....|.|
 Worm    88 -----YIKTHKARKYQYTKIRLWAMTEFDVIVHLDLDILPTRDISTLFECGSFCAS--FRHSDMF 145

  Fly   133 NSGVFVFKPSVDTFAQITEFAVKNGSFDGGDQGLLNQFFADWSTADI----------------KK 181
            ||||||.|.:...|..:.:......|:||||||.||.:|:|...|.:                :.
 Worm   146 NSGVFVLKTNETVFHDMEQHVASAESYDGGDQGFLNTYFSDLKFAPMYDPNKAPHTCENYSMNRL 210

  Fly   182 HLPFVYNVTAYASYCYLPAFKQFRDKIKILHFA-GKLKPWLIQFNSETKVASVSSEYAHAQDLIQ 245
            ...|.|::..|    ||...:...|. .|.|:. |..|||                         
 Worm   211 SAQFNYDIGMY----YLNNGRLLVDP-AIFHYTLGPTKPW------------------------- 245

  Fly   246 LWWN--IFCENVIQSLSTEMQTPGNVASDRPAGEMAQGST----------TLECLCL-------- 290
            |||.  ||..|.:...:.:              ||.|||:          |..||.:        
 Worm   246 LWWTYPIFDLNWMWLDARQ--------------EMEQGSSADFDTCVSLATTNCLLIVSLLVIKL 296

  Fly   291 -------NIIRTQS 297
                   |:|.|:|
 Worm   297 VIERFVVNVISTRS 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GygNP_001286666.1 GT8_Glycogenin 4..253 CDD:133018 66/267 (25%)
RfaJ <94..251 CDD:224359 47/175 (27%)
T10B10.8NP_510518.2 GT8_Glycogenin 24..266 CDD:133018 67/292 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1424146at2759
OrthoFinder 1 1.000 - - FOG0001116
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X386
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

Return to query results.
Submit another query.