DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyg and gyg-1

DIOPT Version :9

Sequence 1:NP_001286666.1 Gene:Gyg / 37419 FlyBaseID:FBgn0265191 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_508608.1 Gene:gyg-1 / 180644 WormBaseID:WBGene00006863 Length:429 Species:Caenorhabditis elegans


Alignment Length:553 Identity:177/553 - (32%)
Similarity:254/553 - (45%) Gaps:132/553 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AWVTLTTNDTYSLGALVLAHSLKRAKTAHQLAVLVTPNVSQAMRDRLKEVYNVVQEVNVLDSQDA 69
            ||:||.|||.|:.|||||.|||:.|.|..::..|::..||..:|.:|:|.::.|..|:|.:|.|:
 Worm     4 AWITLATNDNYAQGALVLVHSLRTAGTTRKIHCLISNEVSAPVRKQLEEHFDDVSIVDVFNSNDS 68

  Fly    70 ANLALLSRPELGVTFTKLHCWRLVQFEKCVFLDADTLVLQNCDELFEREELSAAPDVSWPDCFNS 134
            .||.|:.||:|||||||||||||.|:.||||||||||||:|.||||.|.:.|||.|:.|||.|||
 Worm    69 DNLRLIERPDLGVTFTKLHCWRLTQYTKCVFLDADTLVLRNADELFTRPDFSAASDIGWPDSFNS 133

  Fly   135 GVFVFKPSVDTFAQITEFAVKNGSFDGGDQGLLNQFFADWSTADIKKHLPFVYNVTAYASYCYLP 199
            ||||:.|:.:|:.|:.:|||.:||:|||||||||.||::|.....:..|||:||:||.|.|.|..
 Worm   134 GVFVYVPNNETYRQLVDFAVTHGSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAFYTYAA 198

  Fly   200 AFKQFRDKIKILHFAGKLKPWLIQFNSETKVASVSSEYAHAQDLIQLWWNIFCENVIQSLSTEMQ 264
            |:|::....||:||.|.:|||            ..|...|..:..|.|..|:..:|         
 Worm   199 AYKRYGANTKIVHFIGSVKPW------------HGSAAVHTGEHFQQWQKIYHAHV--------- 242

  Fly   265 TPGNVASDRPAGEMAQGSTTLECLCLNIIRTQSEFAADELHQRQQHEFYQQQKLHHHLLHVRQFR 329
                                                   .|..:.:|.......||   |..:.|
 Worm   243 ---------------------------------------NHTSRTNEHAAVFPSHH---HTPEHR 265

  Fly   330 DPWADYYENLEKEPQEQEQEQQRHQHQQQHHNPSQNHSQDNGNADAAAHENDSTIANANATDWHH 394
            ...|| :..:|::.....:......|..|..|...::..|...:|  :|.|:....:....:.||
 Worm   266 SHSAD-HPKIERKDSIVREIGNFVMHVVQSVNILPSYDTDANTSD--SHRNNEPHKHDQQREEHH 327

  Fly   395 DDACHPPAPTRPLPQIQNQAHNANATANAEDFSFVDVNSNELNISQPPEHASYSSDTATPTAT-- 457
            :           ||      ||...|.:.|....  |.|.:...||.|:   |::|:.|....  
 Worm   328 E-----------LP------HNKFQTPHEESQDI--VGSTDCFGSQMPK---YNADSETDREVEQ 370

  Fly   458 -ATPTATPTLTPTPHHSVHSQTVEKATSHQQEHEVAATTPPEAGLAGALSQLRIGQQRTPEQEAY 521
             ...|..|...|              ...::|::.|:.:..|                       
 Worm   371 ITNNTPCPAFVP--------------FERREEYQAASPSTEE----------------------- 398

  Fly   522 ENQMRRQCWESGQIDYTGADSFENIWKKISQTL 554
                ||..||:||.||.|.|:|.:|.:.:::.|
 Worm   399 ----RRAAWEAGQPDYLGRDAFVHIQEALNRAL 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GygNP_001286666.1 GT8_Glycogenin 4..253 CDD:133018 125/247 (51%)
RfaJ <94..251 CDD:224359 77/156 (49%)
gyg-1NP_508608.1 GT8_Glycogenin 3..238 CDD:133018 124/245 (51%)
RfaJ 6..>220 CDD:224359 118/225 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 254 1.000 Domainoid score I1114
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 295 1.000 Inparanoid score I1664
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1424146at2759
OrthoFinder 1 1.000 - - FOG0001116
OrthoInspector 1 1.000 - - otm14505
orthoMCL 1 0.900 - - OOG6_101901
Panther 1 1.100 - - LDO PTHR11183
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2133
SonicParanoid 1 1.000 - - X386
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.000

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