DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lapsyn and si:ch211-237i5.4

DIOPT Version :10

Sequence 1:NP_611561.1 Gene:Lapsyn / 37418 FlyBaseID:FBgn0034602 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_021327091.2 Gene:si:ch211-237i5.4 / 557635 ZFINID:ZDB-GENE-131121-468 Length:346 Species:Danio rerio


Alignment Length:328 Identity:80/328 - (24%)
Similarity:139/328 - (42%) Gaps:58/328 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SEVRKCTYGHIDKLLRIRCYDLDLKEVPQNLKSSVEVLDLSHNRIRKLKTSSFQRYTDIKFLMLY 90
            |.:.:| |.|.|   .:.|:....::||..|.....:|||..||:.::::.:|.....::.|:|.
Zfish    22 SHLCQC-YEHSD---LVDCHARGFEDVPHGLPHGTWLLDLGGNRLTEIRSRAFAGLWSLRILVLS 82

  Fly    91 DNMILSVEVGTFEPLTSLQEIDLSNNGLTTIPLELFQ-LPRLRNLYIDSNELTSL---------- 144
            |:.|.:::...|..|:.|:::|:|:|.||.||....: |..||.|.:|.|.|..|          
Zfish    83 DSNIQALQSQAFFSLSFLEKLDMSHNNLTQIPPNFSESLSSLRELRLDHNALQLLKPPGLEHLEN 147

  Fly   145 ---------NLQALEKPI---RAPLEYLNVAGCELQELPD--LGILPKLWQLNASMNPLQNFRID 195
                     ::|:||...   .:.|.:|.:.|..|..:.|  |.:||.|..|....|.:....::
Zfish   148 LAKLDLSHNHIQSLEPGAFRGLSRLRHLYLQGNHLDVIRDRSLTMLPALEVLQLGNNNISQIEVN 212

  Fly   196 SLANMCHLQVIDLTKSQLSQ------CGCQQVTNHLMMLGASP-----KFVPVCLEALDIRECPL 249
            :||.:..|.::.|..:||..      ...:..|.||::.| :|     ....|..:.|.:|.   
Zfish   213 ALAPLHSLSLLGLEGNQLEHLNFKTFLSLRTATTHLLLSG-NPWSCDCDLHRVFSKLLSVRH--- 273

  Fly   250 PYNRTIHSPTF--ASCQTTLQFAETRSFWLFGAGCFGGVCFVLLI-------VIFCVIHCRRKRA 305
                 :|...:  .:|:...|.|.....|:....|......||:|       |...:|...|||.
Zfish   274 -----LHVDDYHNVTCREPWQLAGASLAWVDSQLCVAETVTVLVITATVIVTVFGALIMAERKRK 333

  Fly   306 QRR 308
            :|:
Zfish   334 KRK 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LapsynNP_611561.1 LRR <34..>214 CDD:443914 53/204 (26%)
leucine-rich repeat 39..59 CDD:275380 4/19 (21%)
leucine-rich repeat 60..83 CDD:275380 6/22 (27%)
leucine-rich repeat 84..107 CDD:275380 6/22 (27%)
leucine-rich repeat 108..130 CDD:275380 9/22 (41%)
leucine-rich repeat 131..154 CDD:275380 10/44 (23%)
leucine-rich repeat 157..178 CDD:275380 7/22 (32%)
leucine-rich repeat 179..202 CDD:275380 5/22 (23%)
si:ch211-237i5.4XP_021327091.2 None

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