DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lapsyn and islr2

DIOPT Version :9

Sequence 1:NP_611561.1 Gene:Lapsyn / 37418 FlyBaseID:FBgn0034602 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001013541.1 Gene:islr2 / 541396 ZFINID:ZDB-GENE-050320-95 Length:712 Species:Danio rerio


Alignment Length:184 Identity:57/184 - (30%)
Similarity:83/184 - (45%) Gaps:34/184 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RKCT----YGH--IDKLLRIRCYDLDLKEVPQNLKSSVEVLDLSHNRIRKLKTSSFQRYTDIKFL 87
            ::|.    |.|  :|      |...||.|||..|.|:...|.||.|:|:.||:.:|...|.:..|
Zfish    24 KQCACSDKYNHQFVD------CAYKDLVEVPVGLPSNASTLSLSANKIKVLKSKTFVNVTQVTSL 82

  Fly    88 MLYDNMILSVEVGTFEPLTSLQEIDLSNNGLTTIPLE-LFQLPRLRNLYIDSNELTSLNLQALEK 151
            .|..|.|::||..|..||..|:.:|:|||.:...|.| |..|..|:.|.:::||:.|:...|.. 
Zfish    83 WLAHNEIITVERDTLAPLIQLKNLDISNNKIVHFPWEDLANLGALQLLKMNNNEMVSIPKNAFS- 146

  Fly   152 PIRAPLEYLNVAGCELQELPDLGILPKLWQLNASMNPLQNFRIDSLANMCHLQV 205
                          .|::|..:.|      .|.....:.....||||.|.|||:
Zfish   147 --------------NLKDLRSIRI------NNNKFTTIVQGTFDSLAAMSHLQI 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LapsynNP_611561.1 leucine-rich repeat 39..59 CDD:275380 7/19 (37%)
LRR_8 58..118 CDD:290566 24/59 (41%)
leucine-rich repeat 60..83 CDD:275380 8/22 (36%)
leucine-rich repeat 84..107 CDD:275380 9/22 (41%)
LRR_RI <94..>249 CDD:238064 33/113 (29%)
LRR_8 106..167 CDD:290566 15/61 (25%)
LRR_4 106..145 CDD:289563 14/39 (36%)
leucine-rich repeat 108..130 CDD:275380 9/22 (41%)
leucine-rich repeat 131..154 CDD:275380 6/22 (27%)
leucine-rich repeat 157..178 CDD:275380 3/20 (15%)
leucine-rich repeat 179..202 CDD:275380 6/22 (27%)
islr2NP_001013541.1 leucine-rich repeat 35..53 CDD:275380 8/23 (35%)
LRR_RI <47..>184 CDD:238064 49/155 (32%)
LRR_8 53..113 CDD:290566 24/59 (41%)
leucine-rich repeat 57..78 CDD:275380 8/20 (40%)
leucine-rich repeat 79..102 CDD:275380 9/22 (41%)
LRR_8 102..161 CDD:290566 19/79 (24%)
leucine-rich repeat 103..126 CDD:275380 9/22 (41%)
leucine-rich repeat 127..150 CDD:275380 7/37 (19%)
leucine-rich repeat 151..174 CDD:275380 6/28 (21%)
LRRCT 183..>221 CDD:214507
IG_like 252..345 CDD:214653
Ig 256..345 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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