DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lapsyn and kek1

DIOPT Version :9

Sequence 1:NP_611561.1 Gene:Lapsyn / 37418 FlyBaseID:FBgn0034602 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001303320.1 Gene:kek1 / 34688 FlyBaseID:FBgn0015399 Length:880 Species:Drosophila melanogaster


Alignment Length:203 Identity:59/203 - (29%)
Similarity:98/203 - (48%) Gaps:8/203 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IRCYDLDLKEVPQNLKSSVEVLDLSHNRIRKLKTSSFQR--YTDIKFLMLYDNMILSVEVGTFEP 104
            :.|.|..|.::|:::..:.:|||:|.|:::.|....|.|  ..:::.|.|.:..|..:|..||:.
  Fly   105 VECIDRHLIQIPEHIDPNTQVLDMSGNKLQTLSNEQFIRANLLNLQKLYLRNCKIGEIERETFKG 169

  Fly   105 LTSLQEIDLSNNGLTTIP-LELFQLPRLRNLYIDSNELTSLNLQALEKPIRAPLEYLNVAGCELQ 168
            ||:|.|:|||:|.|.|:| |.|..:|.||.|.:.||.:..:..||...  ...|..|:::.|::|
  Fly   170 LTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASNHIHKIESQAFGN--TPSLHKLDLSHCDIQ 232

  Fly   169 EL--PDLGILPKLWQLNASMNPLQNFRIDSLANMCHLQVIDLTKSQ-LSQCGCQQVTNHLMMLGA 230
            .:  ...|.|..|..|..:.|.|......::..:..|..|:|..:. |..|..:.....||....
  Fly   233 TISAQAFGGLQGLTLLRLNGNKLSELLPKTIETLSRLHGIELHDNPWLCDCRLRDTKLWLMKRNI 297

  Fly   231 SPKFVPVC 238
            .....|||
  Fly   298 PYPVAPVC 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LapsynNP_611561.1 leucine-rich repeat 39..59 CDD:275380 4/16 (25%)
LRR_8 58..118 CDD:290566 22/61 (36%)
leucine-rich repeat 60..83 CDD:275380 8/24 (33%)
leucine-rich repeat 84..107 CDD:275380 7/22 (32%)
LRR_RI <94..>249 CDD:238064 45/149 (30%)
LRR_8 106..167 CDD:290566 23/61 (38%)
LRR_4 106..145 CDD:289563 18/39 (46%)
leucine-rich repeat 108..130 CDD:275380 11/22 (50%)
leucine-rich repeat 131..154 CDD:275380 7/22 (32%)
leucine-rich repeat 157..178 CDD:275380 6/22 (27%)
leucine-rich repeat 179..202 CDD:275380 4/22 (18%)
kek1NP_001303320.1 leucine-rich repeat 103..122 CDD:275380 4/16 (25%)
LRR_RI <119..277 CDD:238064 48/159 (30%)
leucine-rich repeat 123..148 CDD:275380 8/24 (33%)
LRR_8 148..207 CDD:290566 25/58 (43%)
leucine-rich repeat 149..172 CDD:275380 7/22 (32%)
leucine-rich repeat 173..196 CDD:275380 11/22 (50%)
LRR_8 195..255 CDD:290566 17/61 (28%)
leucine-rich repeat 197..220 CDD:275380 7/24 (29%)
leucine-rich repeat 221..244 CDD:275380 6/22 (27%)
leucine-rich repeat 245..268 CDD:275380 4/22 (18%)
LRRCT 277..327 CDD:214507 7/29 (24%)
IG_like 338..429 CDD:214653
Ig 346..426 CDD:143165
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24366
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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