DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lapsyn and Lrrn4

DIOPT Version :10

Sequence 1:NP_611561.1 Gene:Lapsyn / 37418 FlyBaseID:FBgn0034602 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001417380.1 Gene:Lrrn4 / 311443 RGDID:1305256 Length:735 Species:Rattus norvegicus


Alignment Length:332 Identity:76/332 - (22%)
Similarity:127/332 - (38%) Gaps:92/332 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QLLTFIVCLQLL--HSAGFIIQSEV---RKCTYGHIDKLLR-----------------IRCYDLD 48
            |||..::.||::  ||...:.|.::   |....|..|...|                 :...:..
  Rat     8 QLLQLLLQLQMVQSHSLEGLSQHQIPLFRLTQLGVWDSHDRRPNDSSCEGLPAAGATTLNLANRS 72

  Fly    49 LKEVPQNLKSSVEVLDLSHNRIRKLKTSSFQRYTDIKFLMLYDNMILSVEVGTFEPLTSLQEIDL 113
            |:.:|..|..::.:||.|||.:..|.....:|..::..|.|:.|.|..:......| |.|.|:||
  Rat    73 LERLPSCLPRTLRILDGSHNLLHALSEPVLRRLPELSVLTLHHNRISVLHWDGSTP-TGLHELDL 136

  Fly   114 SNNGLTTIP---------LELFQL----------------PRLRNLYIDSNELTSLNLQALE--- 150
            |:|.|..:|         |.|..|                |.|:.|.:..::|..:..:|..   
  Rat   137 SHNLLAELPPCSGLSRSSLSLLSLAGNPLQALQPRTFACFPELQFLNLSCSKLGHIAQEAFAGVD 201

  Fly   151 -KPIRAPLEYLNVAGCELQELPDLGI--LPKLWQLNASMNP-LQNFRIDSLANMCHLQVIDLTKS 211
             .|:.| ||.|:::|..|:.:....|  ||||..|.....| |:....|......:|:::|    
  Rat   202 GGPLEA-LELLDLSGTNLERVESEWIRNLPKLKSLYLRKMPRLKTLEGDIFKMTPNLRLLD---- 261

  Fly   212 QLSQCGCQQ----VTNHLMMLGASPKFVPVCLEALDIRECPL----PYNRTIHS----------- 257
                  ||:    .:.|..:...:|.     |:.|.::.|.|    |:  |::|           
  Rat   262 ------CQESPALTSVHTEIFQDTPN-----LQVLQLQNCNLSSFGPW--TVNSSQVLLVSLFGN 313

  Fly   258 PTFASCQ 264
            |...||:
  Rat   314 PLICSCE 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LapsynNP_611561.1 LRR <34..>214 CDD:443914 53/228 (23%)
leucine-rich repeat 39..59 CDD:275380 4/36 (11%)
leucine-rich repeat 60..83 CDD:275380 7/22 (32%)
leucine-rich repeat 84..107 CDD:275380 5/22 (23%)
leucine-rich repeat 108..130 CDD:275380 11/46 (24%)
leucine-rich repeat 131..154 CDD:275380 5/26 (19%)
leucine-rich repeat 157..178 CDD:275380 7/22 (32%)
leucine-rich repeat 179..202 CDD:275380 5/23 (22%)
Lrrn4NP_001417380.1 None

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