DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lapsyn and Gp1ba

DIOPT Version :9

Sequence 1:NP_611561.1 Gene:Lapsyn / 37418 FlyBaseID:FBgn0034602 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_034456.2 Gene:Gp1ba / 14723 MGIID:1333744 Length:734 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LapsynNP_611561.1 leucine-rich repeat 39..59 CDD:275380
LRR_8 58..118 CDD:290566
leucine-rich repeat 60..83 CDD:275380
leucine-rich repeat 84..107 CDD:275380
LRR_RI <94..>249 CDD:238064
LRR_8 106..167 CDD:290566
LRR_4 106..145 CDD:289563
leucine-rich repeat 108..130 CDD:275380
leucine-rich repeat 131..154 CDD:275380
leucine-rich repeat 157..178 CDD:275380
leucine-rich repeat 179..202 CDD:275380
Gp1baNP_034456.2 LRR 28..>204 CDD:227223
leucine-rich repeat 28..47 CDD:275380
LRR 1 48..69
leucine-rich repeat 51..72 CDD:275380
LRR 2 72..93
leucine-rich repeat 73..94 CDD:275380
LRR 3 94..115
leucine-rich repeat 95..117 CDD:275380
LRR 4 117..140
leucine-rich repeat 118..141 CDD:275380
LRR 5 141..162
leucine-rich repeat 142..165 CDD:275380
LRR 6 165..188
leucine-rich repeat 166..189 CDD:275380
LRR 7 189..210
leucine-rich repeat 190..211 CDD:275380
LRRCT 221..281 CDD:214507
DUF5585 <257..539 CDD:375359
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 406..429
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 460..526
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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