DRSC/TRiP Functional Genomics Resources

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Protein Alignment tud and Tdrd7

DIOPT Version :9

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:XP_006238169.1 Gene:Tdrd7 / 85425 RGDID:619724 Length:1146 Species:Rattus norvegicus


Alignment Length:1242 Identity:236/1242 - (19%)
Similarity:397/1242 - (31%) Gaps:441/1242 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1284 VHLRPVMPLFMEDRRSFICPYPVVLSSFQALVVYTAKPYRVYVQPQAIVPSMQTLLDNMYEHYKA 1348
            :.::..||.|:|.:.......|    .|       |..|.:..:|.      .|||       :.
  Rat   138 MRVKKTMPFFLEGKPKATLRQP----GF-------ASDYSISKKPN------PTLL-------RE 178

  Fly  1349 KGDSL-KKFDV-------------------GQICAVRSSDGNWYRARISGKDSNAACFEVFYIDY 1393
            ||.:| .|.||                   ..:..:||.. ...:.:..|......|..:|    
  Rat   179 KGSTLGAKADVDMPPYPDAPVQRHVSMSANSSVTVLRSHP-EASKLQFMGYSPKPHCLLLF---- 238

  Fly  1394 GNTEEIKRDDIKALDAKFYEHAS-GFAVEINLPIGR---------PSNDT----KLKARISEILE 1444
                    ....:|.|.|..|.| ....|:|..:.:         |::.|    :::.||.|||:
  Rat   239 --------SPKSSLPAPFQTHISRACPKEVNDNLNQTVEKPNVTPPASYTNKMDEVQNRIKEILD 295

  Fly  1445 EKVVTIKSIEVRRSHLIADVILENNQSVIDLLKAEKLVPGKDLDYMRKQMEKGKSRTYE---YIE 1506
            :                     .||...|..|      |....::.::.:.:|..:.:|   :|.
  Rat   296 K---------------------HNNGIWISKL------PHFYKEFYKEDLNQGVLQQFEHWPHIC 333

  Fly  1507 TVDLTLDEEEDKGRKETVSKSGSANASPKKKQHNDKDREPKKSKPAEPARTVAPQPVALKTPSPV 1571
            ||     |:...|.::.:....      |::|....|::|:|.:|..|                 
  Rat   334 TV-----EKPCGGGQDLLLYPA------KREQPLRSDQDPEKERPPPP----------------- 370

  Fly  1572 PAEPAPVPKPATPVPEVVEVPEINPTVREAAAE-----------SKQAPAQEDPYKDLDCVVLSH 1625
            ||....||...:|.        :.|.|:|..||           |....|.||.||         
  Rat   371 PAPRQEVPSKGSPA--------VMPDVKEKVAELLGKYSSGLWASALPKAFEDMYK--------- 418

  Fly  1626 CDNPAQFYVHPIDQLSKLNQLHENLQIVSPSLPQLMNVVNGADCVSMYSVDKCWYRAKIIDAELM 1690
                .:|   |.|.|..|..|.                            |.|            
  Rat   419 ----VKF---PEDALKNLASLS----------------------------DVC------------ 436

  Fly  1691 VLLFIDY--GNTDCVSDATDIKESMWSHIEPFCLPCALPIRPKGTADWVDAANGIFNESYSKVPR 1753
               .|:|  |||                 :...|...||:                  ...|:.:
  Rat   437 ---TINYISGNT-----------------QKAILYAKLPL------------------PTDKILK 463

  Fly  1754 LEYLTQGDHYTTSYV---------NMYIDGEDVAKKLIADGFARPLEYLASGCSCYISHVNGICD 1809
            .|...|||....|.:         ||....:|..:.:.......|.|...|.....:|:.|.:..
  Rat   464 DEAQAQGDFDIKSMIEQEYLQIEKNMAESADDFVEDITVPPLVIPTEASPSVLVVELSNTNDVVI 528

  Fly  1810 FFIQLERDSKALELIE----LYLRKKDTLKPLEGFEKGLIVAALFEDDELWYRAQLQKELPDSRY 1870
            .::..:. |.|.||:|    .|..:...:.|::....|.::|...|:| .|.|||: ....:::.
  Rat   529 RYVGKDY-SAAQELMEDEMKEYYSRNPRVTPIQTVHVGQLLAVNAEED-AWLRAQI-ISTDENKI 590

  Fly  1871 EVLFIDYG--NTSTTSKCLMLSEEIASLPSLSKKCSLQ----LPDAYISWSPEAEAKFAELT-GE 1928
            :|.::|||  .....||...|:....||...:.||.|.    |.|     .|........|| |:
  Rat   591 KVCYVDYGFCENIEKSKAYRLNPRFCSLSFQATKCKLAGLEILND-----DPNLVKVVESLTCGK 650

  Fly  1929 GELVFTTQLLKPGQDHVTIDLLLD--GENIID----RLLPLCQRKEPKEASKESLAVTTKAIITH 1987
               :|..::|  .:..:.:.:|.|  ||:.|:    .|..:|.|.  .|...:..|:.|...:|:
  Rat   651 ---IFAVEIL--DKSDIPLVVLYDTSGEDDININATCLKAICDRS--LEVHLQVDAMYTNVKVTN 708

  Fly  1988 VENTSRIYLQFSEKDSLMDIICEKLNG-SKLQPKTE-----KAAVDDMCV-VQFADDL------- 2038
            :.:...:|.|         :.|:.||. :.|..|||     |....:..: :.|...:       
  Rat   709 ICSDGTLYCQ---------VPCKGLNKLNDLLHKTEDYFHCKHMTSEYFISLPFCGKICLFHCKG 764

  Fly  2039 EFYRSRILEVLEDDQYKVILIDYGNTT--VVDKLYELPQEFTLIKPVAEICSMEPSAI----FEK 2097
            ::.|..|..|.......|..:|.||:|  .|.:|.|:|..|     :.|:.::.|.||    .:.
  Rat   765 KWLRVEITNVHSSRALDVQFLDSGNSTSVKVSELREIPPRF-----LQEMLAIPPQAIKCCLADL 824

  Fly  2098 NKALTLTTFDALL-------------------DSCKGVVAVEFV--------------------- 2122
            .:::.:.|.||:|                   |..:||..|...                     
  Rat   825 PQSIGMWTPDAVLWLRDSVLNCSDCSIKVTKVDEARGVAYVYLFTPKNFPDPHRSINRQITNADL 889

  Fly  2123 --------------------NKSAS---------------PPVVRLTTKDKRSLKIYEHLQKLVQ 2152
                                |::||               |.|:|.:..|..|....|.|...|.
  Rat   890 WKHQKDVFLSAVSAAASSPGNRNASTPAPGSPAESLRKSHPEVLRKSVLDHTSSFSLEELPPPVH 954

  Fly  2153 AELKLIQKRNENSECIISYGNSPKSFYVQMKHNSADLDLIVKTL---QSLKKEKLKKLIDPTTNS 2214
                 :.|..|:.:..:.....|..|.:|.......|:::::.:   .|:.:|:     ......
  Rat   955 -----LSKSGEHMDVYVPVACHPGHFVIQPWQEIHKLEVLMEEMILYYSVSEER-----HIAVER 1009

  Fly  2215 NGVCYSQEDACYYRCSIKSVLDPSQGF-EVFLLDYG-NTLV-VPEVWQLPQEIEPIPSLALHCQL 2276
            :.|..::.:..:||..:|.:|  :.|. .|:.|||| :.|| :.:|..|......:|..|:..||
  Rat  1010 DQVYAAKVENKWYRVLLKGIL--TNGLVSVYELDYGKHELVNIRKVQPLVDVFRKLPFQAVTAQL 1072

  Fly  2277 SKIPMDVSDEKLEEAFAALLEQHFGELYEITTQPNEDETKPLIAELRINYKDFVQELVSTVTGVQ 2341
            :.:......|:....|.                 |..|.|||:|            ||.||....
  Rat  1073 AGVKCSQWSEEASMVFR-----------------NHVEKKPLVA------------LVQTVIEHA 1108

  Fly  2342 KPLEAEL 2348
            .|.:.::
  Rat  1109 NPWDRKV 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 DUF1421 198..>397 CDD:284607
TUDOR 406..524 CDD:278965
TUDOR 454..510 CDD:197660
TUDOR 591..707 CDD:278965
TUDOR 644..693 CDD:197660
TUDOR 1012..1132 CDD:278965
TUDOR 1062..1119 CDD:197660
TUDOR 1309..1425 CDD:278965 25/136 (18%)
TUDOR 1354..1411 CDD:197660 10/75 (13%)
TUDOR 1614..1727 CDD:278965 16/114 (14%)
TUDOR 1666..1711 CDD:119391 7/46 (15%)
TUDOR 1791..1906 CDD:278965 30/120 (25%)
TUDOR 1843..1886 CDD:119391 13/44 (30%)
TUDOR 1975..2089 CDD:278965 28/129 (22%)
TUDOR 2028..2069 CDD:119391 10/50 (20%)
TUDOR 2159..2277 CDD:278965 26/123 (21%)
TUDOR 2210..2264 CDD:197660 15/56 (27%)
TUDOR 2345..2458 CDD:278965 0/4 (0%)
TUDOR 2396..2437 CDD:119391
Tdrd7XP_006238169.1 LOTUS_1_TDRD7 38..124 CDD:193600
LOTUS_2_TDRD7 283..349 CDD:193587 17/97 (18%)
LOTUS_3_TDRD7 388..452 CDD:193588 24/139 (17%)
TUDOR 507..629 CDD:278965 32/124 (26%)
TUDOR 565..607 CDD:119391 12/43 (28%)
TUDOR 696..823 CDD:278965 31/140 (22%)
TUDOR 755..800 CDD:119391 10/44 (23%)
TUDOR 957..1074 CDD:278965 27/123 (22%)
TUDOR 1011..1055 CDD:119391 14/45 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22948
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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