DRSC/TRiP Functional Genomics Resources

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Protein Alignment tud and tapas

DIOPT Version :9

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:NP_611475.3 Gene:tapas / 37304 FlyBaseID:FBgn0027529 Length:1222 Species:Drosophila melanogaster


Alignment Length:1174 Identity:225/1174 - (19%)
Similarity:382/1174 - (32%) Gaps:427/1174 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1465 ILENNQSVIDLLKAEKLVPGKDLD--------YMRKQMEKGKSRTYEYIETVDLTLDEEE----- 1516
            :...|...|...|.| |....|||        ...||.|| ::|.....||:.:|::.::     
  Fly   182 VFNKNPEYITRRKKE-LKKEDDLDRGQITKEVAREKQKEK-ETRDRAVTETIFVTIENKKAPVMN 244

  Fly  1517 DKGRKETVSKSGS--------------ANASPKKKQHND-----------KDREPKKSKPAEPAR 1556
            ..|.:.....:|.              .|::.:::|...           :.|.|:...|.....
  Fly   245 GHGPRHVKVANGQDKHNDGKPPLRAILGNSASQRQQDTSTVYHSPESSFKRPRHPRVMYPGHQRT 309

  Fly  1557 T---------VAPQPVALKTPSPVPAEPAPVPKPATPVPEVVEVPEINPTVREAAAESKQ----- 1607
            |         |.||     :.:|.|| .||:..||:        ||...|...|.|..|:     
  Fly   310 TGVSVNHRLKVTPQ-----SDAPTPA-VAPITPPAS--------PEYAQTTTAAKATYKEDIHGG 360

  Fly  1608 --------------APAQEDPYKDLDCVVLSHC-----DNPAQFYVHPIDQLSKLNQLHENLQI- 1652
                          .|.:.||..|....:..:|     :.||      .:..:||..||.::|| 
  Fly   361 QGETGNVVTNPKVKVPLKFDPSLDPVSTLNFYCAANDFEKPA------YNIFNKLRNLHCSVQIA 419

  Fly  1653 --VSPSLPQ----------------LMNVVNGADCVSMYSVDKCWYRAKIIDAELMVLLFID--- 1696
              |..|.||                :..:::..   |...:..|.:.    |.|     |||   
  Fly   420 GDVYSSYPQEFTDKETAYQRTAQIAIQRIMHAQ---SHQKLSACTFS----DVE-----FIDGLY 472

  Fly  1697 ------------------YGNTDCVSDATDIKESMWSHIEPFCLPCALPIRPKGTADWVD---AA 1740
                              ||:|        .::.:.||                   |.|   .:
  Fly   473 KELLKHPHGILGHKLEDWYGST--------FRQHLPSH-------------------WYDLIVKS 510

  Fly  1741 NGIFNE----------------------SYSKVPRLEYLTQGDHYTTSYVNMYIDGEDVAKKLIA 1783
            |.|..|                      |.:.:|::....|.....:...||:|...|..|.:  
  Fly   511 NKIRVEHGIDPRIILFANDPGSSEPDRTSITTLPQMVLPWQSSEGGSHDWNMFISFCDSTKIV-- 573

  Fly  1784 DGFARPLEYLASGCSCYISHVNGICDFFIQLERD-SKALELIELYLRKKDTLKPL--EGFEKGLI 1845
              :||.::.:|:               |.:|.:. .:.:|  ..:.|:| ..||.  |.:     
  Fly   574 --WARMIDQIAN---------------FEELTKHIGRQME--SPHFRQK-VSKPYAQEVY----- 613

  Fly  1846 VAALFEDDELWYRAQ---LQKELPDSRYEVLFIDYGNTS------------------TTSKCLML 1889
               |.|..:.|.|.:   :.:|....||.  |||:|:.:                  ..:.||.:
  Fly   614 ---LVEMPDGWNRVRAISVDEETRSGRYH--FIDFGDVAMFHSEDLFHCPPQFLALPAQAVCLSM 673

  Fly  1890 ------SEEIASLPSLSKKCSLQLPDAYISWSPEAEAKFAELTGEGE-----------LVFTTQL 1937
                  .:...:|..|:|:...|...|::.   ..|.:|.||.|..:           ||.|...
  Fly   674 YALDKFEDHPHALQVLTKELDGQTVVAHVL---TTEKQFLELGGSAQGVVENGKRRACLVATLYD 735

  Fly  1938 LKPGQD-HVTIDLLLDGENIIDRLLPLCQRKEPKEASKESLAVTTKAIITHVENTSRIY------ 1995
            ....:| |:        .:::.:.:..| ...|..:.::.:..||..:::|:.:...:.      
  Fly   736 TSTAEDIHL--------NDLVAKRITKC-TPAPSLSDEKKIGKTTPILVSHINDDGDLMVLLRND 791

  Fly  1996 -LQFSEK------------------DSLMD---IIC-EKLNGSK-----------LQPKTEKAAV 2026
             |:|.|:                  |.|.|   .:| |.::|.|           |.|..|  :.
  Fly   792 DLKFVERSIAQTVADLGEQDRVSYSDLLHDRHIFVCDETVDGVKQWFRGRLVTRPLNPDEE--SF 854

  Fly  2027 DDMCVVQFADD--------LEFYR-----------------SRILEVLE---------------- 2050
            |    |.:.||        ...||                 .|:.:|.|                
  Fly   855 D----VYYVDDGRQRKAHISNIYRLEANNRALATFPPQAIPVRLHDVPEIGGHMLHRLRGLIPWR 915

  Fly  2051 -DDQYKVILIDYGNTTVVDKLYELPQEFTLIKPVAEICSME-PSAIFEKNKALTLTTFDALLDSC 2113
             :...||:.:|.|...|...:.|.|:...:...:.....:| .|:|..:....||.:.:..|.. 
  Fly   916 TEALLKVVAMDGGKPLVNVFIREDPESMYMCVNIGLRLELEMASSIHPEKYDHTLLSSNVQLPR- 979

  Fly  2114 KGVVAVEFVNKSASPPVVRLT---TKDKR-------------SLKIYEHLQKLVQAELKLIQKRN 2162
            :|..:..|.|:|:|..:|..|   |.:|:             .||.||.:..:           .
  Fly   980 RGSFSSVFSNQSSSSDLVATTPPVTPEKKPSARSTGSTFSSLMLKDYEAIPAV-----------G 1033

  Fly  2163 ENSECIISYGNSPKSFYVQMKHNSADLDLIVKTLQSLKKEKLKKLIDPTTNSNGVCYSQEDA--C 2225
            ...|..::...:|..|.||.......|..::|.||...::...|.:.|:..:.|..|:..|:  .
  Fly  1034 AYFEVRVALSVNPGHFAVQPYKYYNQLQTLMKNLQEHCQKTAAKGVQPSQLAIGEAYAAPDSEGV 1098

  Fly  2226 YYRCSIKSVLDPSQGFEVFLLDYGNTLVV--PEVWQLPQEIEPIPSLALHCQLSKIPM-DV--SD 2285
            |:|.||..:.|  :...|..:|.|:..|:  .::..|..|:..:|.:||..||..|.: ||  |.
  Fly  1099 YHRVSIHKIYD--EIIHVRFVDVGDDGVIACDQLKTLNPELRKLPKMALPAQLYGIQLTDVVWSK 1161

  Fly  2286 EKLEEAFAALLEQHF-GELYEITTQPNEDETKPLIAELRINYKDFVQELVSTVTGVQKPLEAELH 2349
            |.........|.|.| |.:..:|.|  :|..:.|..           |||.|.|    |.:.:||
  Fly  1162 ENCVRFRELSLGQKFIGIVRRMTKQ--KDGGRALCL-----------ELVDTST----PKDIKLH 1209

  Fly  2350 NCVV 2353
            ..::
  Fly  1210 EILI 1213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 DUF1421 198..>397 CDD:284607
TUDOR 406..524 CDD:278965
TUDOR 454..510 CDD:197660
TUDOR 591..707 CDD:278965
TUDOR 644..693 CDD:197660
TUDOR 1012..1132 CDD:278965
TUDOR 1062..1119 CDD:197660
TUDOR 1309..1425 CDD:278965
TUDOR 1354..1411 CDD:197660
TUDOR 1614..1727 CDD:278965 27/157 (17%)
TUDOR 1666..1711 CDD:119391 10/65 (15%)
TUDOR 1791..1906 CDD:278965 25/144 (17%)
TUDOR 1843..1886 CDD:119391 11/63 (17%)
TUDOR 1975..2089 CDD:278965 32/195 (16%)
TUDOR 2028..2069 CDD:119391 13/82 (16%)
TUDOR 2159..2277 CDD:278965 29/121 (24%)
TUDOR 2210..2264 CDD:197660 14/57 (25%)
TUDOR 2345..2458 CDD:278965 2/9 (22%)
TUDOR 2396..2437 CDD:119391
tapasNP_611475.3 LOTUS_TDRD_OSKAR 7..92 CDD:193586
TUDOR 563..673 CDD:278965 27/141 (19%)
TUDOR 766..896 CDD:278965 23/135 (17%)
TUDOR 1032..1151 CDD:278965 30/131 (23%)
TUDOR 1087..1131 CDD:119391 12/45 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22948
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4998
43.910

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