DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tud and tej

DIOPT Version :9

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:NP_610950.2 Gene:tej / 36590 FlyBaseID:FBgn0033921 Length:559 Species:Drosophila melanogaster


Alignment Length:628 Identity:134/628 - (21%)
Similarity:204/628 - (32%) Gaps:218/628 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 DQTDLAEVRRLVVNQIV----KITVE-------PTQICDQKFASLRWKDFELNEFL--------- 197
            |..:|:.|:::|.:.:|    |:|||       ..:.|...::.|.:||.|  .||         
  Fly     3 DGGELSLVKKVVHSLVVSSPGKLTVEQLMRDYRSEEGCTLPYSKLGFKDAE--SFLRSIPDTVTV 65

  Fly   198 ---VQQKQI-GVSVDKQLMMDHCKKLWKDNPQSPVTEYNNNSIHNSKTPMEIAREQLAVRQSLAA 258
               .|...| .|:..|..   |.:||.:...:|     .|...|..|.........|.......:
  Fly    66 TGHGQMAWITAVATAKSA---HIQKLVRCQKKS-----KNRGSHKPKYCYASEPSNLVFINESVS 122

  Fly   259 RLDAQR----SVQVTPSRPLNADAPDYT----PKHLPLVNVTNVQVQMPGLNNTQKPVFVSTNPY 315
            ::..::    :.||..:..|....|:|.    |.|.|.::......|......||:|.|    |.
  Fly   123 KMKNRKAPFPTYQVPRNLKLPVSYPNYNRLLYPVHTPHIDQMISTGQQQSTLRTQRPSF----PC 183

  Fly   316 NRANYQPAVPAAQPYVPKANPRSQYTYYNVRMNKPINAMPPPAGPHVPIQHFNQQANNVSLSYVP 380
            | ||.:..         |.|..||    ..|..:|.........|.:..:  |:|...       
  Fly   184 N-ANSKSL---------KVNDWSQ----KDRKQEPSKERNNQKYPKITTE--NKQEKE------- 225

  Fly   381 ARFTPPPTPSIAQHQIPIPAFRTTSLTVGLT----------YDVVISYVENGPYLFWVHLKSSDH 435
                   |..:||      ||...|:.|..|          |:.........|:::....:..|.
  Fly   226 -------TEELAQ------AFENLSVDVAPTDHQEKLKCEIYEDNEDEFVRDPFIYGEVKEKEDE 277

  Fly   436 --------------DLSTMMGQIERTKLKALAQAPELGTACV-ARFSEDGHLYRAMVCAVYAQRY 485
                          ||.:|. ..::..:|.| ..||   .|: ...|:||....|:  ..||..:
  Fly   278 AVVLAFDAVSEDGFDLLSMT-TTQQNAVKPL-DPPE---DCLHYASSDDGEDENAI--PAYAVDH 335

  Fly   486 RVVYVDYGNSELLSASDLFQIPPELLEIKPFAFRFALAGTKEIEPIDDSMKRIFKKSAIYRNFEL 550
            ||:.|||....:.||   |.:|                 .::||.|.:..:||            
  Fly   336 RVLDVDYPRDAVRSA---FTLP-----------------ARDIESIIELQQRI------------ 368

  Fly   551 TVQAPESVGSMQTCHLNQNGTNMLELLRQLKNSRQSYKKAEQLENDDAVEIRFIDSPSNFYVQKV 615
            .||....|        |.:..|.                  .:.|||     |.|     |..:.
  Fly   369 RVQLVSLV--------NPHNFNF------------------WIYNDD-----FKD-----YEAQF 397

  Fly   616 ANIGKFEQLMDEMFSYYNANQRVP------DQLILGAPCIVKCDQEWYRAEILRVDDS-----VI 669
            ||:..|.:      |..:.|..:|      |.|     |:|:|...|.||::|....|     :.
  Fly   398 ANMQTFYE------SSESKNYTMPLFLITTDHL-----CVVRCTSGWERAKVLGYRSSNNKMTIE 451

  Fly   670 VRHVDFG-----YEQNVKRHLIGHIAEKHLEMPRQAIKCCLKG 707
            |..||.|     .:||||     .:.:....:|||    ||.|
  Fly   452 VELVDIGDIIRVSQQNVK-----FLIKPFALLPRQ----CLAG 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 DUF1421 198..>397 CDD:284607 41/207 (20%)
TUDOR 406..524 CDD:278965 28/142 (20%)
TUDOR 454..510 CDD:197660 18/56 (32%)
TUDOR 591..707 CDD:278965 35/131 (27%)
TUDOR 644..693 CDD:197660 16/58 (28%)
TUDOR 1012..1132 CDD:278965
TUDOR 1062..1119 CDD:197660
TUDOR 1309..1425 CDD:278965
TUDOR 1354..1411 CDD:197660
TUDOR 1614..1727 CDD:278965
TUDOR 1666..1711 CDD:119391
TUDOR 1791..1906 CDD:278965
TUDOR 1843..1886 CDD:119391
TUDOR 1975..2089 CDD:278965
TUDOR 2028..2069 CDD:119391
TUDOR 2159..2277 CDD:278965
TUDOR 2210..2264 CDD:197660
TUDOR 2345..2458 CDD:278965
TUDOR 2396..2437 CDD:119391
tejNP_610950.2 LOTUS_TDRD_OSKAR 7..93 CDD:193586 22/90 (24%)
TUDOR 379..488 CDD:278965 37/155 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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