DRSC/TRiP Functional Genomics Resources

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Protein Alignment tud and rnf17

DIOPT Version :9

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:XP_021334643.1 Gene:rnf17 / 334519 ZFINID:ZDB-GENE-030131-6451 Length:1521 Species:Danio rerio


Alignment Length:1498 Identity:298/1498 - (19%)
Similarity:499/1498 - (33%) Gaps:445/1498 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1358 VGQICAVR------SSDGNWYRARISGKDSNAACFEVFYIDYGNTEEI---KRDDIKALD---AK 1410
            :|.|...|      .|...|...:.....|:||.         :|||.   |.|.:|.||   .|
Zfish    77 IGLIYTARMNTKKGHSGDKWKSQKFKSPPSSAAV---------HTEENAEGKPDVVKVLDEALTK 132

  Fly  1411 FYEHASGF-AVEINLPIGRPSNDTKLKARISEILEEKVVTIKSIEVRRSHLIADVILENNQSVID 1474
            ..|:.:.. .:...|..|......|.::||...::|.|...|||.::|..::...:     |.:|
Zfish   133 ATENLNQLDKLHQTLANGVHGQLRKERSRIIREIDEAVEKAKSILLKRRSMLVSTL-----SSVD 192

  Fly  1475 LLKAEKLVPGKDLDYMRKQMEKG--KSR---------TY----EYIETVDLTLDEE--------- 1515
            ||.:...:..|.::...|::...  |:|         ||    :.:||:.:.:|.|         
Zfish   193 LLFSGGQMECKRIEERIKELRTAIQKARHVRQVPSLETYCDLEKILETLHIPVDLESYDMSSLTL 257

  Fly  1516 --------EDKGRKETV---------------------------------------SKSGSANAS 1533
                    :..|..|:|                                       |..|.|:|.
Zfish   258 RSGLSCHLQVDGFTESVKVFLKITDTDDNCIVEEITVEPFQHVVKSGVEMWDNSSQSVQGKADAI 322

  Fly  1534 PKKKQHNDKDREPKKSKPAEPARTVAPQPVALKTPSPVPAEPAPVPKPATPVPEVVEVPEINPTV 1598
            |:|..:..:..|       :......|:....:..:.:...        .||.|...:...|...
Zfish   323 PRKSNNTRRFME-------KMMEDTCPEIADTRVNAGLGRN--------LPVHEPRRMERYNKGY 372

  Fly  1599 REAAAESKQAPAQEDPYKDLDCVVLSHCDNPAQFYV-----HPIDQLSKLNQLHENLQIVSPSLP 1658
            |:......:.|....| |.:..||.:|..||..|||     |.:.|  ||.:..........|..
Zfish   373 RKQRRPQFEKPTNPQP-KLVQYVVTTHIVNPGHFYVRYMAEHKLGQ--KLTKKISEFCSGERSFF 434

  Fly  1659 QLMNVVNGADCVSMYSVDKCWYRAKII-----------------DAELMVLLFIDY--------- 1697
            ...:.:.....:.:...|..|.|.|:.                 :...:.:.|:||         
Zfish   435 TFSDEITTGSLLFISWKDDMWCRVKVTELFQKECFQSVTKCLASEVSRLCVYFLDYGFFKGFSIP 499

  Fly  1698 ------GNTDCV---SDATDIKESMWSHIEPFCLPCAL-PIRPKGTADWVDAANGIFNESYSKVP 1752
                  |..:|:   ...|.|:.:.|:   |..:.|:| .|.|   ||.|...:...:|....|.
Zfish   500 SDGGLSGLNECLRRPDGITLIEMANWA---PLAIKCSLKDIIP---ADLVKGWSSEASEEMRNVL 558

  Fly  1753 RLEYLTQGDHYTTSYVNMYIDGE-------DVAKKLIAD-------------------------- 1784
            |.|           ...|.:.||       |:.|..:||                          
Zfish   559 RNE-----------TAEMQVFGEDGDALLVDLKKTSMADLKKNSMVSLREHLVFMELARFYCPVI 612

  Fly  1785 --GFARPLEY------LASGCSCYISHVNGICDFFIQLERDSK----ALELIELYLRKKDTLKPL 1837
              |.|..|.|      |....:..:||||...||::||..:::    ..:|.:.|.:.|.. ...
Zfish   613 TTGSAPLLFYPSVQPSLNVEVNAMVSHVNTPSDFYVQLVENTEYPLLHSKLQDCYNQPKSN-NEC 676

  Fly  1838 EGFEKGLIVAALFEDDELWYRAQLQKELPDSR-YEVLFIDYGNTSTTS-KCLM-LSEEIASLPSL 1899
            :.:...|..|.:...|:.|.|.|: ...|..| .||.|:|:|...|.| |.|. :.:|...||.:
Zfish   677 QVYCPSLSQACVAFHDQEWSRVQV-TGFPGGRMVEVRFVDFGYKRTLSVKDLRHIKDEFFVLPEM 740

  Fly  1900 SKKCSL-QLPDAYISWSPEAEAKFAELTGEGELVFTTQLLK---PGQDHVTIDLL-----LDGEN 1955
            :..|:| .:..:..:|:.||...|.||. ||:|:  |.:.|   |....|.:.|.     ..|.:
Zfish   741 ALWCNLNDVISSQETWANEACESFKELV-EGKLM--TVVAKKNVPSSKPVPVCLFEISDDCTGAS 802

  Fly  1956 IIDRL---------------------------------LPLCQRKEPKEASKE-----SLAVTTK 1982
            |.|.|                                 ||:..  .|..||:|     ||....|
Zfish   803 IGDELVKKGYAVYNKDTQVRDAQPLETTSWDPPFEEEALPVVM--TPSSASEELKPSLSLPSCLK 865

  Fly  1983 AI---ITHVENTSRIYLQFSEKDSLMDIICEKLNG--SKLQPKTEKAAVDDMCVVQFADDLEFYR 2042
            .|   :|||.:...|.:|..:.|:.:..|.:.|..  ||.:|:..:...:..|.|......|  |
Zfish   866 DIRVRVTHVTSPGNICVQLLQFDNQLKRIHDTLKNLFSKSEPQEMQWEAEMYCAVNNTGVWE--R 928

  Fly  2043 SRILEVLEDDQYKVILIDYGNTTV--VDKLYELPQEFTLIKPVAEICSMEPSAIFEKNKALTLTT 2105
            .::..|......:|:..|:|||..  ||.|..|..:  ||......|::............|.|.
Zfish   929 GQVCSVSTCGVAEVLRCDFGNTVKLHVDNLRPLHPD--LIGSFLLECNLSGVRPAGGRSTWTATA 991

  Fly  2106 FDALLDSCKGVVAVEFVNKSASPPVV----------------------RLTTKDKRSLKIYEHLQ 2148
            .|.:.....|.:|:..:.:.::.||:                      .|..|::::..::....
Zfish   992 CDFISHYLTGAMALMAIKEPSTRPVLVSLFCSNRAGQNVSFADFLISEGLALKERKAEMVFSEES 1056

  Fly  2149 KLVQAELKLI----------QKRNENSECIISYGNSP------------------KSFYVQMKHN 2185
            .||.....:|          ::.|...|.:.::...|                  :.....|.|.
Zfish  1057 VLVTEPQPVISPTQTPPTPSRRINPPPERVKTHSYPPPELPPCGHILMSISAVSEQGVIYAMTHQ 1121

  Fly  2186 S-ADLDLI-------VKTLQSLKKEKLKKLIDPTTNSNGVCYSQEDACYYRCSIKSVLDPSQGFE 2242
            : .:.|.:       :|||...|....|.::       |......|..:||..::.|:  ....:
Zfish  1122 AVCEFDRLRERLQQHIKTLPRQKNYNWKGVL-------GCAVMGTDMFWYRGQVQEVI--GGHVK 1177

  Fly  2243 VFLLDYGNTLVVPEVWQLPQEI-EPIPSLALHCQLSKI--------------------------- 2279
            |..:|.|....:|.....|..: |.:|.|.:.||::.:                           
Zfish  1178 VRYVDQGLVESIPVCHVYPMVLCEDVPQLCVPCQINGVLPIGKGWQWDAVVLMKELLLGRSVNVQ 1242

  Fly  2280 ----PMD----VSDEKLEE--AFAALLEQHFGELYEITTQPNED-ETKPLIAEL---RINYKDFV 2330
                |.|    |:.|.:.:  |.:.::..|....::......|| ..||.:.:|   .:|.:...
Zfish  1243 IMEHPKDPCGCVTVEIMVDGMALSKIMVHHQYATFDPAISSQEDYVVKPPMPDLDDWDLNTEGLE 1307

  Fly  2331 QELVSTVTGVQKPLEA------------------ELHNCVVVQFDGPMSFYVQMESDVPALEQMT 2377
            ::  ..|.||.|.|..                  |:..||:   |..:....|.||....|||:.
Zfish  1308 EQ--PPVLGVYKELHIPKERKHFPAKVKHIRTPNEVFLCVL---DKSLCKLEQDESMEETLEQVN 1367

  Fly  2378 DKLLDAEQDLPAFSDLKEGALCVAQFPEDEVFYRAQI---RKVLDDGKCEVHFIDFGNNAV--TQ 2437
            :.:    ::|...:|.....||:|:: .|..:|||:|   .:|....|..|..:|||::.:  ..
Zfish  1368 ENI----ENLSLLTDFPIECLCLAEY-SDGKYYRAKILGFSEVTPSVKLLVRHVDFGSDDIIPLH 1427

  Fly  2438 QFRQLPEEL--------------AKPARYSRHCELDASTISKCDAALLQSFIDTRFSETFQVEIL 2488
            :.||||..|              .||...|...|....::.....|::: .||....|...| :.
Zfish  1428 KLRQLPASLHHFPCAAVYVKLAGFKPTNVSSDLERIPYSLDWTMKAMME-MIDLLNGELTAV-VT 1490

  Fly  2489 ATK 2491
            |||
Zfish  1491 ATK 1493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 DUF1421 198..>397 CDD:284607
TUDOR 406..524 CDD:278965
TUDOR 454..510 CDD:197660
TUDOR 591..707 CDD:278965
TUDOR 644..693 CDD:197660
TUDOR 1012..1132 CDD:278965
TUDOR 1062..1119 CDD:197660
TUDOR 1309..1425 CDD:278965 18/79 (23%)
TUDOR 1354..1411 CDD:197660 16/64 (25%)
TUDOR 1614..1727 CDD:278965 30/153 (20%)
TUDOR 1666..1711 CDD:119391 11/79 (14%)
TUDOR 1791..1906 CDD:278965 35/128 (27%)
TUDOR 1843..1886 CDD:119391 15/44 (34%)
TUDOR 1975..2089 CDD:278965 33/125 (26%)
TUDOR 2028..2069 CDD:119391 11/42 (26%)
TUDOR 2159..2277 CDD:278965 26/144 (18%)
TUDOR 2210..2264 CDD:197660 10/53 (19%)
TUDOR 2345..2458 CDD:278965 34/149 (23%)
TUDOR 2396..2437 CDD:119391 14/45 (31%)
rnf17XP_021334643.1 RING_Ubox 8..60 CDD:327409
TUDOR 394..534 CDD:306940 27/144 (19%)
TUDOR 633..746 CDD:306940 32/114 (28%)
TUDOR 865..977 CDD:306940 30/115 (26%)
TUDOR 1092..1214 CDD:306940 24/130 (18%)
TUDOR 1326..1450 CDD:306940 31/131 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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