DRSC/TRiP Functional Genomics Resources

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Protein Alignment tud and papi

DIOPT Version :10

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:NP_608657.1 Gene:papi / 33401 FlyBaseID:FBgn0031401 Length:576 Species:Drosophila melanogaster


Alignment Length:320 Identity:67/320 - (20%)
Similarity:133/320 - (41%) Gaps:67/320 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   599 VEIRFIDSPSNFYVQKVA-NIGKFEQLMDEMFSYY-NANQRVPDQLILGAP-------CIVKCDQ 654
            |.:..:.||:.|:||.:. ...|.:.::.||.||| :|..|.  :.:|.||       .:.|.|:
  Fly   263 VYVSAVASPTKFWVQLIGPQSKKLDSMVQEMTSYYSSAENRA--KHVLTAPYVGQIVAAVFKFDE 325

  Fly   655 EWYRAEILRV--------DDSVIVRHVDFGYEQNVKRHLIGHIAEKHLEMPRQAIKCCLKGFENS 711
            :||||||:.:        :..:.:..||:|..:.:....|..:....|.:..||::|.|...: |
  Fly   326 KWYRAEIVDIMPNQYNPKEQVIDLYFVDYGDSEYISPADICELRTDFLTLRFQAVECFLANVK-S 389

  Fly   712 ELSEDKIT------DQFEMLAEESNIRRRTFSVRIFRIEPDGLNVVNLLAK-------------- 756
            .:..:.||      .:||.|.|.::.|:....|..::..|.....|:..||              
  Fly   390 TIQTEPITWPKSSIAKFEELTEVAHWRKLIARVVTYKERPRATTAVSAAAKEGTPLPGVELFDPA 454

  Fly   757 ---NLNVMKKLYK--LSMPFEQYLSLEK----GQFNANNTRAESVISSELN-------KSHILNS 805
               .||:...:..  .::|.:....:..    ...|:::|..|..:|:.:.       .|..::.
  Fly   455 DNSELNIADLMITQGFALPLDDSYPVRSRSSTPSSNSDSTIEELCVSNPVTPLTPHSPMSMSIDV 519

  Fly   806 TSIGETENRLQEQEKEQQQKKVDVRQQQLAVEIPQAVKSVSGSK-NSTDWDKRSSTSAGS 864
            .||.:.||....|:.:..|.|::...          :|:::.:| .:||.:..::.:|.:
  Fly   520 DSITQAENEHLAQQLQHLQHKLNGND----------IKNINPAKLTATDLENGNNNNAST 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 TUDOR 411..524 CDD:425754
TUDOR 595..707 CDD:425754 34/124 (27%)
TUDOR 1016..1132 CDD:425754
TUDOR 1309..1425 CDD:425754
TUDOR 1620..1727 CDD:425754
TUDOR 1795..1906 CDD:425754
TUDOR 1980..2089 CDD:425754
TUDOR 2163..2277 CDD:425754
TUDOR 2347..2458 CDD:425754
papiNP_608657.1 KH_1 68..129 CDD:459630
KH-I 140..209 CDD:469614
Tudor_TDRD2 281..383 CDD:410483 26/103 (25%)
Blue background indicates that the domain is not in the aligned region.

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