DRSC/TRiP Functional Genomics Resources

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Protein Alignment tud and Rnf17

DIOPT Version :10

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:NP_001028215.1 Gene:Rnf17 / 30054 MGIID:1353419 Length:1640 Species:Mus musculus


Alignment Length:1865 Identity:348/1865 - (18%)
Similarity:609/1865 - (32%) Gaps:700/1865 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   501 SDLFQIPPELLEIKPFAFRFALAGTKEIE-PIDDSMKRIFKKSAIYRNFELTVQAPESVGSMQTC 564
            |.|..:||:::.          ..:.::| .:|..:..:...|:|:||    |..|.:|.| :|.
Mouse    95 SSLEALPPKMVN----------NCSSDLEKTVDQLINDLEHSSSIHRN----VSNPSAVMS-ETE 144

  Fly   565 HLNQ----NGTNMLELLRQLK--NSRQSYKKAEQLENDDAVEIRF------IDS----------- 606
            .:::    .|.|..:|...:|  :|.|...:.|.....:|||.:|      :||           
Mouse   145 EIDEALKIAGCNFEQLSNAIKMLDSTQDQTRQETHSLTEAVEKQFDTLLASLDSRKKSLCEELIR 209

  Fly   607 PSNFYVQKVANIGKFEQLMDEMFSYYNANQRVPDQLILGAPCI-VKCDQEWYRAEILRVDDSVIV 670
            .::.|:.|:..:..:   ::|..|..:|..::..:| ..||.: ..||.            :.|:
Mouse   210 RTDDYLSKLVTVKSY---IEEKKSDLDAAMKIAKEL-RSAPSLRTYCDL------------TQII 258

  Fly   671 RHVDFGYEQNVKRHLIGHIAEKHLEMPRQAIKC----CLKGFENSELSEDKITDQFEMLAEESNI 731
            |.:...:|..:.:  :..|..::  .||..|.|    |:    .|.:.:.:..|..:...:|:. 
Mouse   259 RTLKLTFESELSQ--VSSIIPRN--TPRLDINCSEAICM----FSSMGKIEFEDSTKCYPQENE- 314

  Fly   732 RRRTFSVRIFRIEPDGLNVVNLLAKNLNVMKKLYKLSMPFEQYLSLEKGQFNANNTRAESVISSE 796
                          ||.||    .|..|..|:|.     .:.|.||||.:.:|      :|::.|
Mouse   315 --------------DGQNV----QKKFNNRKELC-----CDVYSSLEKKKVDA------AVLTDE 350

  Fly   797 LNKSHILNSTSIGETENRLQEQEKEQQQKK-VDVRQQQLAVEIPQAVKSVSGSKNSTDWDKRSST 860
            ..:..:.     .|..:|..|.:|:|..|: |.|...:....:||.     ||......:     
Mouse   351 TPEPPLQ-----AEAPDRHLEGKKKQPTKEMVVVTSPKTIAVLPQL-----GSSPDVIIE----- 400

  Fly   861 SAGSKDSKRQQQQQIQRIDRHLDFSCETQSTGSYSSGMSSPRKGNRQQNGRTPIQSPRHNEKQEA 925
                           :.|:.:|: ||.|..                      ||::         
Mouse   401 ---------------EIIEENLE-SCFTDD----------------------PIET--------- 418

  Fly   926 KKNARFSNSESPRRSRDGQQGNQRSQNAPQGYAQKPQRQKSTLDGNISSKRSSGVGSDIASSSSE 990
                                         .||.:||.::          ::|:.|||        
Mouse   419 -----------------------------SGYPKKPPQK----------EQSAPVGS-------- 436

  Fly   991 SVAAAKPEKYVSLDKPYALQEMKTPSKEAASLSWWLSPFQFYIVPKSVSAKYDNIM------RDM 1049
                                  |....|...:|..:.|..||:      .||..|.      :.|
Mouse   437 ----------------------KAGCPELVFVSHVIHPCHFYV------RKYSQIKDATILEKKM 473

  Fly  1050 REFYRQKQH-QPLQ-LKVGSTVVVRQRKDNAILRATVT----ACNHMMRK--------------Y 1094
            ::...:..| .|.. |::|:.:.|...|:....|..:|    :....:||              .
Mouse   474 KQVCNRSLHLDPSDILELGARIFVNSIKNRMWCRGIITEIIPSKTKNIRKPCSPTKFSVCEISLI 538

  Fly  1095 RVFCVDTGS----LIT----------------VTSEDIWQL--------EQRFADPPCMAHRCSF 1131
            ::|.||.|:    :||                :|..|...|        |:...|.|.:||.|| 
Mouse   539 QIFMVDFGNSEVLIITGVGDTHEGPEHDGEQHITLSDFCLLLMKSEPYSEELLKDIPHLAHLCS- 602

  Fly  1132 HSVVTNYDPLYIVDRMETFVPVNAKVDCEFVSKEKSNQGSNTSSTCSYTVNIFVNGASLRDMLVK 1196
                           ::..||.|:....|   ||                             .|
Mouse   603 ---------------LKDIVPYNSTEGWE---KE-----------------------------AK 620

  Fly  1197 AEFLTEVAPEIRVNLLAGQQIRGKFTSIRDMTSFKVQFDYGNNVNFLCTYDDAKFVKSNPNLARR 1261
            .|||..|..:..:..:.|::.......::...:.|:..|.                   |...|.
Mouse   621 VEFLKMVNKKAVLMKVFGEEDDVLIVDLQKPPTNKISSDM-------------------PVSLRD 666

  Fly  1262 FKEFYEGKSFALNVKNVCENNIVHLRPVMPLFMEDRRSFICPYPVVL----SSFQALVVYTAKPY 1322
            ...|.|               :...|...|....::.:.:|.:|.:|    :....:|.:...|.
Mouse   667 ALVFME---------------LARFRSQSPRSHSEKNTTLCYHPPILPEEMTEVSVMVCHINSPT 716

  Fly  1323 RVYVQPQAIVPSMQ--TLLDNMYEHYKAKGDSLKKFDV-----GQICAVRSSDGNWYRARISGKD 1380
            ..|:|   ::.::.  :||..:.|.|  ||:..:..::     .|.|..:..||.||||::.|..
Mouse   717 DFYLQ---LMENLDFLSLLKTIEEFY--KGEDGENLEILCPLQNQACVAKFEDGIWYRAKVIGLP 776

  Fly  1381 SNAACFEVFYIDYGNTEEIKRDDIKALDAKFYEHASGFAVEINLPIGRPSNDT----KLKARISE 1441
            .:.. .||.|:|:|||.:|...|::.:..:|.|.... |::..|....||..:    |.|.:..|
Mouse   777 GHRE-VEVKYVDFGNTAKITLKDMRKIKDEFLEPPEK-AIKCKLAYVEPSKKSQWSKKAKEKFEE 839

  Fly  1442 ILEEKVVTIKSIEVRRSHLIADVILENNQSVIDLLKAEKLVPGKDLDYMRKQMEKGKSRTYEYIE 1506
            ..::|.||...|:          |||||..:::|.  :...|||....:..|:.|....:||...
Mouse   840 KTQDKFVTCSVIK----------ILENNVLLVELF--DSRAPGKSAVSINDQLVKEGLASYEAGY 892

  Fly  1507 TVDLTLDEEEDKGRKETVSKSGSANASPKKKQHNDKDREPKKSKPAEPARTVAPQPVALKTPSPV 1571
            |:                                 ||...|..:..:|:                
Mouse   893 TL---------------------------------KDNSKKHLEVWDPS---------------- 908

  Fly  1572 PAEPAPVPKPATPVPEVVEVPEIN----------PTVREAAAESKQAPAQEDPYKDLDCVVLSHC 1626
                          ||.:...|||          |.....:..:|:.|..       .|.|:|  
Mouse   909 --------------PEEIITSEINNLSPLSVKSLPNENFQSLYNKELPVN-------ICNVIS-- 950

  Fly  1627 DNPAQFYVHPIDQLSKLNQLHENLQIVSPSLPQLMNVVNGAD--CVSMYSVDKCWYRAKI---ID 1686
              |.:.||..:...:.||.|.|.: :.:....:...|....|  |.........|.|.:|   :.
Mouse   951 --PEKIYVQWLLTENLLNSLEEKM-VAAYEHSEWKPVKWECDMHCAVKVPAKNQWRRGQILRMVT 1012

  Fly  1687 AELMVLLFIDYG-----NTDCVSDATDIKESMWSHIEPFCLPCAL-PIRPKGTAD---------- 1735
            .:|:.:|..|.|     |..|:.:..:..::|..    ..|.|:| .|||.|.:|          
Mouse  1013 DKLVEVLLYDVGVELVVNIHCLRELQENLKTMGR----LSLECSLVDIRPTGGSDKWTATACDCL 1073

  Fly  1736 -------------------W---------------VDAANGIF--------------NESYSKVP 1752
                               |               ||.:..:.              :.|:|...
Mouse  1074 SLHLTGAIATIILQESNTTWPLPVKIFCRDEKGERVDVSKYLIKKGLALRERRVSKSSNSHSPEK 1138

  Fly  1753 RLEY-LTQGDHYTTSYVNMYID-GEDVAKKL----IADGFARPLEYLASGC---------SCYIS 1802
            .||. |.|||...|....:..| .:.:|.|:    :.|...:..|..::||         |.:.:
Mouse  1139 SLEIPLEQGDSVVTKCFKINFDTNKKIADKVNEHKVPDSKGKKSESRSTGCYRPPAVPNTSSFEA 1203

  Fly  1803 HVNGICD---FFI--------------QLERDSKALELIELYLRKKDTLKPLEGFEKGLIVAALF 1850
            .|..|.|   .|:              :::.:.|.|.|:|.|..||.....:.|           
Mouse  1204 IVTCIGDDGTIFVVPKLSEFELIKMMDEIQSNLKCLGLLEPYSWKKGEPCAVRG----------- 1257

  Fly  1851 EDDELWYRAQLQKELPDSRYEVLFIDYGNTSTTSKC----LMLSEEIASLPSLSKKCSL--QLPD 1909
             .|.||||.::. |:......|.::|:|.|....:|    ::|..:   .|.....|.|  .||.
Mouse  1258 -SDTLWYRGKVM-EVVGGTIRVQYLDHGFTEKIPQCHLYPILLYPD---TPQFCIPCQLYQTLPV 1317

  Fly  1910 AYISWSPEAEAKFAELTGEGEL-VFTTQLLKPGQDHVTIDLLLDG------------------EN 1955
            .. :|.|:|.....||..:.|: :...:|.......:::.|..||                  |.
Mouse  1318 GN-TWQPDAIELLQELLSKREVDIHIMELPNNSWGKLSVHLYFDGMSLSHFMAHHKYCIFEHTEE 1381

  Fly  1956 II---------------------DRLLP----------LCQRKEPKEASKESLAVTTKAIITHVE 1989
            |.                     |.|||          |.....|.|   |..||..|.|::..|
Mouse  1382 IFKEKPRGQNKKYEDENWKIRFEDLLLPEMEAPVLPPYLSSLLPPPE---ELFAVQVKHIVSPDE 1443

  Fly  1990 -----NTSRIYLQF--------------SEKDSLMDIICEKLNGS--KLQPKTEKAAVDDMCVVQ 2033
                 ::...|.||              ||.::|.:.: ::.|.:  ...|.|:.:: :..|:.:
Mouse  1444 MYICLDSEDSYTQFNHHGDTDDSGVSWESESENLEEAL-QRFNKNVETFPPLTDFSS-EMPCLAE 1506

  Fly  2034 FADDLEFYRSRILEVLEDDQYKVIL--IDYGNT--TVVDKLYELP 2074
            :||.| :||::|:.:.|.:...|::  :|||.|  ..:::|.::|
Mouse  1507 YADGL-WYRAKIISIKEFNPLSVLVLFVDYGCTEKLTINRLRQIP 1550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 TUDOR 411..524 CDD:425754 4/22 (18%)
TUDOR 595..707 CDD:425754 25/133 (19%)
TUDOR 1016..1132 CDD:425754 35/169 (21%)
TUDOR 1309..1425 CDD:425754 31/122 (25%)
TUDOR 1620..1727 CDD:425754 26/117 (22%)
TUDOR 1795..1906 CDD:425754 30/142 (21%)
TUDOR 1980..2089 CDD:425754 27/120 (23%)
TUDOR 2163..2277 CDD:425754
TUDOR 2347..2458 CDD:425754
Rnf17NP_001028215.1 PRK03918 87..>273 CDD:235175 41/210 (20%)
CC_brat-like 158..>242 CDD:475168 16/86 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..376 7/32 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..435 7/91 (8%)
Tudor_TDRD4_rpt1 490..565 CDD:410485 13/74 (18%)
Tudor_TDRD4_rpt2 728..823 CDD:410486 28/98 (29%)
Tudor_TDRD4_rpt3 968..1049 CDD:410487 15/85 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1170..1191 4/20 (20%)
Tudor_TDRD4_rpt4 1247..1314 CDD:410488 18/82 (22%)
Tudor_TDRD4_rpt5 1494..1598 CDD:410489 16/59 (27%)
Blue background indicates that the domain is not in the aligned region.

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