Sequence 1: | NP_476773.1 | Gene: | tud / 37417 | FlyBaseID: | FBgn0003891 | Length: | 2515 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038959137.1 | Gene: | Tdrd1 / 292129 | RGDID: | 1306140 | Length: | 1174 | Species: | Rattus norvegicus |
Alignment Length: | 1484 | Identity: | 288/1484 - (19%) |
---|---|---|---|
Similarity: | 473/1484 - (31%) | Gaps: | 533/1484 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 911 RTPIQSPRHNEKQEAKKNARFSNSESPRRSRDGQQGNQRS------QNAPQGYAQKPQRQKSTLD 969
Fly 970 GNISSKRSSGVGSDIASSSSESVAAAKPEKYVSLDKPYALQEMKT-PSKEAASLSWW-LSPFQFY 1032
Fly 1033 IVPKSVSAKYDNIMRDMREFYRQKQHQPLQ--LKVGSTVVVRQRKDNAI---LRATV-------- 1084
Fly 1085 -TACNHMMRKYRVFCVDTGSLITVTSEDIWQLEQRFADPPCMAHRCSFHSVVTNYDPLYIVDRME 1148
Fly 1149 TFVPVNAKVDCEF-VSKEKSNQGSNTSSTCSYTVNIFVNGASLRDMLVKAEFLTEVAPEIRVNLL 1212
Fly 1213 AGQQIRGKFTSIRDMTSFKVQFDYGNNVNFLCTYDDAKFVKSNPNLARRFKEFYEGKSFALNVKN 1277
Fly 1278 VCENNIVHLRPVMPLFMEDRRSFICPYPVVLSSFQALVVYTAKPYRVYVQPQAIVPSMQTLLDNM 1342
Fly 1343 YEHYKAKGDSLKKFDVGQICAVR-SSDGNWYRARISGKDSNAACFEVFYIDYGNTEEIKRDDIKA 1406
Fly 1407 LDAKFYEHASGFAVEINLPIGRPSNDTKLKARISEIL-------EEKVVTIKSIEVRRSHLIADV 1464
Fly 1465 ILENNQS--VIDLLKAEKLV---------PGKDLDYMRKQMEKGKSRTYEYIETVDLTLDEEEDK 1518
Fly 1519 GRKETVSKSGSANASPKKKQHNDKDREPKKSKPAEPARTVAPQPVALKTPSPVPAEPAPVPKPAT 1583
Fly 1584 PVPEVVEVPEINPTVREAAAESKQAPAQEDPYKDLDCVVLSHCDNPAQFYVHPIDQLSKLNQLHE 1648
Fly 1649 NL----QIVSPS---LPQLMNVVNGADCVSMYSVDKCWYRAKII---DAELMVLLFIDYGNTDCV 1703
Fly 1704 SDATDIKESMWSHIEPFC-------------LPCALP-IRPKGTADWVDAANGIFNESYSKVPRL 1754
Fly 1755 EYLTQGDHYTTSYVNM--------YIDGE-----DVAKKLIADGFARPLEYLAS--GCSCYISH- 1803
Fly 1804 ---VNG---------------------IC------DFFIQLERDSKALELIELYLRKKD--TLKP 1836
Fly 1837 LEGF--EKGLIVAALFEDDELWYRAQLQKELPDSRYEVLFIDYGNTS--TTSKCLMLSEEIASLP 1897
Fly 1898 SLSKKCSL-QLPDAYISWSPEAEAKF-------------AELTGEGELVFTTQLLKPGQDHVTID 1948
Fly 1949 LLLDGENII--------DRLL------------PLCQRKEPKEASKE-SLAV--TTKAIITHVEN 1990
Fly 1991 TSRIYLQFSEKDSLMDIIC-------EKLNGSKLQPKTEKAAVDDMCVVQFADDLEFYRSRILEV 2048
Fly 2049 LEDDQYKVILIDYGNTTVVDKLYELPQEFTLIKPVAEICSMEPSAIFEKNKALTLTTFDALLDSC 2113
Fly 2114 KGVVAVEFVNKSASPPVVRLTTKDKRSLKIYEHLQKLVQAELK-----LIQKRNENS-------- 2165
Fly 2166 -ECIISYGNSPKSFYVQMKHNSADLDLIVKTLQ-SLKKEK--LKKLIDPTTNSN 2215 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tud | NP_476773.1 | DUF1421 | 198..>397 | CDD:284607 | |
TUDOR | 406..524 | CDD:278965 | |||
TUDOR | 454..510 | CDD:197660 | |||
TUDOR | 591..707 | CDD:278965 | |||
TUDOR | 644..693 | CDD:197660 | |||
TUDOR | 1012..1132 | CDD:278965 | 27/135 (20%) | ||
TUDOR | 1062..1119 | CDD:197660 | 11/70 (16%) | ||
TUDOR | 1309..1425 | CDD:278965 | 20/116 (17%) | ||
TUDOR | 1354..1411 | CDD:197660 | 20/57 (35%) | ||
TUDOR | 1614..1727 | CDD:278965 | 31/135 (23%) | ||
TUDOR | 1666..1711 | CDD:119391 | 14/47 (30%) | ||
TUDOR | 1791..1906 | CDD:278965 | 38/154 (25%) | ||
TUDOR | 1843..1886 | CDD:119391 | 18/44 (41%) | ||
TUDOR | 1975..2089 | CDD:278965 | 30/123 (24%) | ||
TUDOR | 2028..2069 | CDD:119391 | 14/40 (35%) | ||
TUDOR | 2159..2277 | CDD:278965 | 16/69 (23%) | ||
TUDOR | 2210..2264 | CDD:197660 | 3/6 (50%) | ||
TUDOR | 2345..2458 | CDD:278965 | |||
TUDOR | 2396..2437 | CDD:119391 | |||
Tdrd1 | XP_038959137.1 | zf-MYND | 162..198 | CDD:396356 | 5/47 (11%) |
Tudor_TDRD1_rpt1 | 262..391 | CDD:410479 | 39/235 (17%) | ||
Tudor_TDRD1_rpt2 | 512..593 | CDD:410480 | 23/97 (24%) | ||
TUDOR | 709..825 | CDD:395449 | 32/115 (28%) | ||
Tudor_SF | 938..1053 | CDD:413384 | 30/138 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 45 | 1.000 | Domainoid score | I11859 |
eggNOG | 1 | 0.900 | - | - | E1_COG1525 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm45887 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107416 | |
Panther | 1 | 1.100 | - | - | O | PTHR22948 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.810 |