DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tud and TDRD7

DIOPT Version :9

Sequence 1:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster
Sequence 2:NP_055105.2 Gene:TDRD7 / 23424 HGNCID:30831 Length:1098 Species:Homo sapiens


Alignment Length:1237 Identity:239/1237 - (19%)
Similarity:420/1237 - (33%) Gaps:366/1237 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 GDVEYRRIRVVSAD---------LEGQSMRAEIDFVDFGYKRTVDSHDLMFPKQPKLLQNIPLHC 140
            ||:..:.:|.|...         |:|:......|::.|        ..|.||.....|:::|   
Human     4 GDLVSKMLRAVLQSHKNGVALPRLQGEYRSLTGDWIPF--------KQLGFPTLEAYLRSVP--- 57

  Fly   141 FQYIVLGI---------CSEWDQTDLAEVRRLVVNQ---------------IVKITVEPTQICDQ 181
               .|:.|         |.....|:.|.:.:||..|               .||.|: |..:..:
Human    58 ---AVVRIETSRSGEITCYAMACTETARIAQLVARQRSSKRKTGRQVNCQMRVKKTM-PFFLEGK 118

  Fly   182 KFASLRWKDFELNEFLVQQKQIGVSVDKQLMMDHCKKLWKDNPQSPVTEYNNNSIHNSKTPMEIA 246
            ..|:||...|..|          .||.|           |.|| :|:.:..|             
Human   119 PKATLRQPGFASN----------FSVGK-----------KPNP-APLRDKGN------------- 148

  Fly   247 REQLAVRQSLAARLDAQRSVQVTPSRPLNADAPDYTPKHLPLVNVTNVQVQMPGLNNTQKPVFVS 311
                    |:..:.||:.|..:     |:....:...|.:|:                |:.|.:|
Human   149 --------SVGVKPDAEMSPYM-----LHTTLGNEAFKDIPV----------------QRHVTMS 184

  Fly   312 TNPYNR----ANYQPAVPAAQPYVPKANPRSQYTYYNVRMNKPINAMPPPAGPHV--PIQH---- 366
            ||  ||    |:.||.:   |.::.:.:.:......|..:.|| |..||.:..:.  .:|:    
Human   185 TN--NRFSPKASLQPPL---QMHLSRTSTKEMSDNLNQTVEKP-NVKPPASYTYKMDEVQNRIKE 243

  Fly   367 -FNQQANNVSLSYVP----ARFTPPPTPSIAQHQIPIPAFRTTSLTVGLTYDVVISYVENGPYLF 426
             .|:..|.:.:|.:|    ..:.......|.|.....|...|.........|::: |......|.
Human   244 ILNKHNNGIWISKLPHFYKELYKEDLNQGILQQFEHWPHICTVEKPCSGGQDLLL-YPAKRKQLL 307

  Fly   427 WVHLKSSDHDLSTMMGQIERTKLKALAQAPELGTACVARFSE---------DGHLYRAMVCAVYA 482
            ...|.:....||.:.|..:...||...      |.....|.|         ...|:.:.:...:.
Human   308 RSELDTEKVPLSPLPGPKQTPPLKGCP------TVMAGDFKEKVADLLVKYTSGLWASALPKAFE 366

  Fly   483 QRYRVVYVDYGNSELLSASDLFQIPPELLEIKPFAFRFALAGTKEIEPIDDSMKRIFK------- 540
            :.|:|.:.:.....|.|.||:..|  :.:...|   :.|:...|...|.|...|...:       
Human   367 EMYKVKFPEDALKNLASLSDVCSI--DYISGNP---QKAILYAKLPLPTDKIQKDAGQAHGDNDI 426

  Fly   541 KSAIYRNFELTVQAPESVGSMQTCHLNQNGTNMLELLRQLKNSRQSYKKAEQLENDDAVEIRFID 605
            |:.:.:.:   :|..||:.......:.......|.:..:...|    ....:|.|.:.|.||::.
Human   427 KAMVEQEY---LQVEESIAESANTFMEDITVPPLMIPTEASPS----VLVVELSNTNEVVIRYVG 484

  Fly   606 SPSNFYVQKVANIGKFEQLM-DEMFSYYNANQRV-PDQLI-LGAPCIVKCDQE-WYRAEILRVDD 666
            .          :....::|| |||..||:.|.:: |.|.: :|....|..::: |.||:::..::
Human   485 K----------DYSAAQELMEDEMKEYYSKNPKITPVQAVNVGQLLAVNAEEDAWLRAQVISTEE 539

  Fly   667 SVI-VRHVDFGYEQNVKRHLIGHIAEKHLEMPRQAIKCCLKGFENSELSED----KITDQF---- 722
            :.| |.:||:|:.:||::.....:..|...:..||.||.|.|.|  .||:|    |:.:..    
Human   540 NKIKVCYVDYGFSENVEKSKAYKLNPKFCSLSFQATKCKLAGLE--VLSDDPDLVKVVESLTCGK 602

  Fly   723 ----EML---------------AEESNIRRRTF-------------------SVRIFRIEPDGLN 749
                |:|               .::.||.....                   :|::..|..||..
Human   603 IFAVEILDKADIPLVVLYDTSGEDDININATCLKAICDKSLEVHLQVDAMYTNVKVTNICSDGTL 667

  Fly   750 VVNLLAKNLNVMKKLYK----------------LSMPFEQYLSLE--KGQF------NANNTRAE 790
            ...:..|.||.:..|.:                :|:||...:.|.  ||::      |.:::||.
Human   668 YCQVPCKGLNKLSDLLRKIEDYFHCKHMTSECFVSLPFCGKICLFHCKGKWLRVEITNVHSSRAL 732

  Fly   791 SVISSELNKSHILNSTSIGETENRLQEQEKEQQQKKVDVRQQQL---AVEIPQAV-----KSVSG 847
            .|   :...|..:.|..:.|    |:|......|:.:.:..|.:   ..::||::     .:|..
Human   733 DV---QFLDSGTVTSVKVSE----LREIPPRFLQEMIAIPPQAIKCCLADLPQSIGMWTPDAVLW 790

  Fly   848 SKNS-----------TDWDKRSS-------TSAGSKDSKRQQQQQIQRID--RHLDFSCETQSTG 892
            .::|           |..|:...       |.....|..|...:||...|  :|.    :.....
Human   791 LRDSVLNCSDCSIKVTKVDETRGIAHVYLFTPKNFPDPHRSINRQITNADLWKHQ----KDVFLS 851

  Fly   893 SYSSGMSSP--RKGNRQQNGRTPIQSPRHNEKQEAKKN-----ARFSNSESPRRSRDGQQGNQRS 950
            :.|||..||  :.||...:|.|. ::.|.|.....||:     :.||..|.|......:.|....
Human   852 AISSGADSPNSKNGNMPMSGNTG-ENFRKNLTDVIKKSMVDHTSAFSTEELPPPVHLSKPGEHMD 915

  Fly   951 QNAP----QGY-AQKPQRQKSTLD---------GNISSKRSSGVGSDIASSSSESVAAAKPEK-- 999
            ...|    .|| ..:|.::...|:         .::|.:|...|..|       .|.|||.|.  
Human   916 VYVPVACHPGYFVIQPWQEIHKLEVLMEEMILYYSVSEERHIAVEKD-------QVYAAKVENKW 973

  Fly  1000 ------------YVSL-DKPYALQEMKTPSKEAASLSWWLS-PFQFYIVPKSVSAKYDNIMRDMR 1050
                        .||: :..|...|:....|....:..:.. |||      :|:|:...:..:  
Human   974 HRVLLKGILTNGLVSVYELDYGKHELVNIRKVQPLVDMFRKLPFQ------AVTAQLAGVKCN-- 1030

  Fly  1051 EFYRQKQHQPLQLKVGSTVVVRQRKDN----AILRATVTACNHMMRKYRVFCVDTGSLITVTSED 1111
                       |....:::|.|...:.    |:::..:...|...||..|:.|||    ::...|
Human  1031 -----------QWSEEASMVFRNHVEKKPLVALVQTVIENANPWDRKVVVYLVDT----SLPDTD 1080

  Fly  1112 IW 1113
            .|
Human  1081 TW 1082

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tudNP_476773.1 DUF1421 198..>397 CDD:284607 39/213 (18%)
TUDOR 406..524 CDD:278965 22/126 (17%)
TUDOR 454..510 CDD:197660 11/64 (17%)
TUDOR 591..707 CDD:278965 33/120 (28%)
TUDOR 644..693 CDD:197660 12/50 (24%)
TUDOR 1012..1132 CDD:278965 19/107 (18%)
TUDOR 1062..1119 CDD:197660 13/56 (23%)
TUDOR 1309..1425 CDD:278965
TUDOR 1354..1411 CDD:197660
TUDOR 1614..1727 CDD:278965
TUDOR 1666..1711 CDD:119391
TUDOR 1791..1906 CDD:278965
TUDOR 1843..1886 CDD:119391
TUDOR 1975..2089 CDD:278965
TUDOR 2028..2069 CDD:119391
TUDOR 2159..2277 CDD:278965
TUDOR 2210..2264 CDD:197660
TUDOR 2345..2458 CDD:278965
TUDOR 2396..2437 CDD:119391
TDRD7NP_055105.2 LOTUS_1_TDRD7 4..91 CDD:193600 20/100 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..156 10/69 (14%)
LOTUS_2_TDRD7 234..300 CDD:193587 10/66 (15%)
LOTUS_3_TDRD7 338..404 CDD:193588 12/70 (17%)
TUDOR 459..581 CDD:278965 34/135 (25%)
TUDOR 517..559 CDD:119391 12/41 (29%)
TUDOR 648..775 CDD:278965 25/133 (19%)
TUDOR 707..752 CDD:119391 11/51 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 855..874 7/18 (39%)
Interaction with CDK17. /evidence=ECO:0000250 861..1098 50/253 (20%)
Interaction with CABLES1. /evidence=ECO:0000250 893..1098 42/220 (19%)
TUDOR 909..1026 CDD:278965 25/129 (19%)
TUDOR 963..1007 CDD:119391 10/43 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22948
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.